| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3015 |
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| Symbol | |
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| ID | 5079757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3494042 |
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| End bp | 3494647 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640500213 |
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| Product | membrane lipoprotein lipid attachment site |
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| Protein accession | YP_001184527 |
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| Protein GI | 146294103 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0036157 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTGA CTATGAAACA ATTTAAACTG ATTTTTGTGC TGGCTGCCGT AATGGGCCTG
GCTGCATGTC AATCTAAAGT CGAATATGGC GATGCGACTG AAGTTGAAAC CGTCAACGCA
AACTTTGGCT CAACCGATCT TCAGGCTATT GCAGCTAAAA TGGTCGATAG TATGATGACT
TTCCCTCCTA TCGTGGCAAT TACGGCTAAT AACCGCCCGA TTTTATTTGT TGATAGCATC
AAAAACAAAA CGTCTGAACA TATTGATACT GAGTCAGTTA CAGACTCTAT CAGCAACAAA
TTATTGCGTT CTGGCAAGTT CCGCTTTATC GATATGACTA AAGTTGACTC CGTTCGCAAA
CAGTTGGACT ACCAAAACAA TACTGGCATG GTTGATCCAT CTACAGCTAT TAAATTCGGT
CGCCAAATTG GTGCTCAATA CATGCTGTAC GGCAATCTAT CTAGCATAGT GAAGCAAGAT
GGCAGCACCA AAGATGTTTA CTATAAAATG ACCATGCGTT TAATGGATTT AGAAACAGGG
CTGATTGAAT GGTCTGACGA AAAAGAAATC CGTAAAACGA AATCTAAGTC TTTCTTAGGT
ATGTAA
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| Protein sequence | MELTMKQFKL IFVLAAVMGL AACQSKVEYG DATEVETVNA NFGSTDLQAI AAKMVDSMMT
FPPIVAITAN NRPILFVDSI KNKTSEHIDT ESVTDSISNK LLRSGKFRFI DMTKVDSVRK
QLDYQNNTGM VDPSTAIKFG RQIGAQYMLY GNLSSIVKQD GSTKDVYYKM TMRLMDLETG
LIEWSDEKEI RKTKSKSFLG M
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