| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3014 |
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| Symbol | |
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| ID | 5079756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 3492581 |
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| End bp | 3493984 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640500212 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001184526 |
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| Protein GI | 146294102 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3014] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00235052 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCCA CCTTCAGCAC ATCTTTCATT AAGCCTGTCA TCACATCCAT ATTTGCAATC
AGTTTTACGC TGGGTGTAAG TGGCTGCGCC TACAACAGTA TTTTTATTAA CTATCCATCG
CAAATCGCGC CGATAAAACA AGAACTCAAT AGCGCAACAC CGATGGCGGA CATCAATAAA
CTCGCGAGTA ATATTCAAGG TAACGACGGC TTACTCTACG CCCAAGAAGC TGGCCGAGTC
GCACAAGTTG CAGGAGATTT TGCCAATAGT AAAAAATATT ATCAGCAAGC CATCAGTGCC
TATACCGCCT TCGATGATAA AGCCAAAATT AGTGCCAGTG ACTTAGGTGC AACAGCCAGT
AGCTTAGTCT TAAACGACAA TGCCATCCCC TACCGAGGAC CGGGTTATGA GCGCATTATG
CTCCATCAAT ATCAAGCCCT TAACTATTTG TTCAGTGGTG ATTTTCAAGG TGCGTTAGTC
GAAGTTCGTC GCAGTAATGA GCTACAAGGC TCTGAACAAG AACGCTATGA AAAATCACAA
AAATCGGTAC AGGCTATGGC TAATGGTACT GTGGATGCCG AGGTCAATCG CCTTGGGCAA
GCAGCAGGCA CTGTCACAAG CTCCTTCTTA AACGCCTACA GTTATTACAC TACAGGTGTG
CTTCACGAAG TCTTAGGTGA ACCCAACGAT GCCTTTATTG ATTACCGAAA AGCGGCGCAA
ATTACCCCTG ATAATACCTA TTTACAACAG GATTTAGTTC GCCTCGCCAA ACAGCTTGGT
ATGCCACAAT ACGATGAATT TAAACGACGT TGGGGTGAAG CAACTTTACC TAAGCCGAAC
GAAGGGCAAG TTATCCTTAT GGTTGAGCGC GGTTTTGTCC CCGAAAAGCA AGCGCTTACT
GTGCCATTTA CCATACATGG CAACTGGCAA ACCGTATCAC TTGCAACCTA TGGCCCAAAC
AATACTTTTG TACCAGAGAC GCAAATTCAG GGTTTGGGTA CAGTGCTAAA AACGGAACCT
ATTGCCAATA TTGATGCCTT AGCCATCACG GCATTGAAAG AAGATTTACC TGCAACACTT
GTGCGTCAAG TCGCCCGTGT CTATGCAAAA TCAGAAATGG CCTATCAGAT AGAAAAAAGT
GGTCGACCAG GGAATAATGC CGCCGATATT GGCAGCATAG CGATGCAAAT CTTTAACGTA
GTAACGGAAC AAGCGGACCG TCGCAGTTGG TTGACGCTCC CTAAACAAGC ACAAATCGGC
AGGCGTTATC TCAATGCAGG GGAATACACT TTGCAATTAG ATAAGGCGCC GCCAGCTAAA
ATTGACATTG CAGCAGGCAA AACCACCTTA GTCTGGGCAA TTGATACTGG TAATTACACT
CGAATTTATT CAATAATCAT TTAA
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| Protein sequence | MKPTFSTSFI KPVITSIFAI SFTLGVSGCA YNSIFINYPS QIAPIKQELN SATPMADINK
LASNIQGNDG LLYAQEAGRV AQVAGDFANS KKYYQQAISA YTAFDDKAKI SASDLGATAS
SLVLNDNAIP YRGPGYERIM LHQYQALNYL FSGDFQGALV EVRRSNELQG SEQERYEKSQ
KSVQAMANGT VDAEVNRLGQ AAGTVTSSFL NAYSYYTTGV LHEVLGEPND AFIDYRKAAQ
ITPDNTYLQQ DLVRLAKQLG MPQYDEFKRR WGEATLPKPN EGQVILMVER GFVPEKQALT
VPFTIHGNWQ TVSLATYGPN NTFVPETQIQ GLGTVLKTEP IANIDALAIT ALKEDLPATL
VRQVARVYAK SEMAYQIEKS GRPGNNAADI GSIAMQIFNV VTEQADRRSW LTLPKQAQIG
RRYLNAGEYT LQLDKAPPAK IDIAAGKTTL VWAIDTGNYT RIYSIII
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