Gene Sputcn32_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2970 
Symbol 
ID5079865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3446004 
End bp3447134 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content51% 
IMG OID640500170 
Productchaperone protein DnaJ 
Protein accessionYP_001184484 
Protein GI146294060 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID[TIGR02349] chaperone protein DnaJ 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAGC GAGATTATTA CGAAGTATTA GGCGTTGGTC GTGACGCCAG CGAACGTGAA 
ATTAAAAAGG CCTATAAACG TCTGGCCATG AAGTTTCACC CCGATCGTAA CCCAGGCGAT 
AAAGCCGCAG AGGCTAGCTT CAAAGAAGCG AAAGAAGCCT ATGAAATCCT GACCGATACC 
GATAAAAAAG CGGCGTATGA TCAATTTGGT CATGCGGGTG TGGATCCCAA TCGTGGCGGT 
GGTTACGGTG GTGGGCAGGG CGATTTCGGT GATATCTTCG GTGATGTCTT TGGCGATATT 
TTCGGCGGTG GACGTCGTGG CGGTCAACGC CAAGCGGCCC GAGGCTCAGA TTTACGTTAC 
AACCTAGAGT TATCACTGGA AGAAGCGGTT AAAGGCCTGA CGAAAGAACT GCGTATTCCA 
ACACTGGCAA CCTGCGATCT GTGTGATGGC AGCGGGGCGA AAAAAGGCAC ATCGGCAAGT 
ACCTGTACGA CATGCCATGG TCAAGGCCAA GTCCAAATGC GCCAAGGCTT TTTCACGGTG 
CAGCAACCTT GCCCAACCTG TCATGGCCGC GGCAAGATCA TCAAAGATCC TTGCACTAAG 
TGTCATGGCG ATGGCCGTGT TGAAAAGAGC AAAACCTTAT CGGTTAAGAT CCCTGCCGGC 
GTCGATACGG GCGACCGTAT TCGTTTAGCA GGTGAAGGCG AAGCGGGTGA ATTTGGCGCG 
CCTCCGGGGG ATTTATATGT TCAGGTGAGT GTGCGTGAAC ATGCGATTTT CGTCCGTGAT 
GGTAACAACC TCTACTGCGA AGTGCCGATA TCCTTCAGTA AAGCCGCCCT TGGCGGTGAA 
ATTGAAGTGC CTACACTGGA TGGTAAAGTG AGCCTTAAGA TCCCCGCCGA AACACAAACG 
GGCCGTATGT TCCGTTTACG CGGTAAAGGG GTTAAATCGG TGCGTAGCCA TGCCGTAGGC 
GATTTGCTCT GCAAAGTGGT GATGGAAACG CCAGTTAACT TAAACGATCG TCAAAAAGAA 
CTGTTACGCG AATTTGAAGC CACCTTAACG GGTGAGTCAA AGAAGCACAG CCCAAAGGCT 
GAGGGCTTTT TCGATGGCGT GAAAAAGTTC TTCCAAGATC TGAATAGCTA A
 
Protein sequence
MSKRDYYEVL GVGRDASERE IKKAYKRLAM KFHPDRNPGD KAAEASFKEA KEAYEILTDT 
DKKAAYDQFG HAGVDPNRGG GYGGGQGDFG DIFGDVFGDI FGGGRRGGQR QAARGSDLRY 
NLELSLEEAV KGLTKELRIP TLATCDLCDG SGAKKGTSAS TCTTCHGQGQ VQMRQGFFTV 
QQPCPTCHGR GKIIKDPCTK CHGDGRVEKS KTLSVKIPAG VDTGDRIRLA GEGEAGEFGA 
PPGDLYVQVS VREHAIFVRD GNNLYCEVPI SFSKAALGGE IEVPTLDGKV SLKIPAETQT 
GRMFRLRGKG VKSVRSHAVG DLLCKVVMET PVNLNDRQKE LLREFEATLT GESKKHSPKA 
EGFFDGVKKF FQDLNS