Gene Sputcn32_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2948 
Symbol 
ID5078175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3420613 
End bp3421650 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content48% 
IMG OID640500148 
Producthypothetical protein 
Protein accessionYP_001184462 
Protein GI146294038 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC GTATTGTGAT TTGTGCCGAT GGGACTTGGA ATCGGCCCGA GAAAGATCTT 
AAGGTCGATT TCCCAACCAA TGTGCTGCGC CTCGCGCGGG CGATTAGCCC CTTGGCCAGT
GATGGCAAAC CCCAGCAAGT GTTTTATGAC TGGGGTGTGG GTTCCTATTA CGATCAAACC
ATCGGTGGTG CGACAGGGCG CGGTTTACAT AAAAACATCA TGGATGGTTA TCGCTATATA
GTGCAAAACT ATTCCCCCGG CGATGAGATT TACCTCTTTG GCTTTAGTCG TGGTGCTTAC
ACAGTGCGTT GCCTGTGTGG CTTGATTAAT AACTGCGGCA TACTCAAACG TCCCGATGCG
GCGTTGATTC AACAAGCTTT CGACCACTAT AAAAAAAGCA GTGCGCCCTT TGCGCCTGAT
GGTGAAAAAT CCCTCGAATT TAGAGCGAGA TACAGTCATG AATCTCGGGA AATCAAGTTT
GTTGGTGTGT GGGATACCGT GGGTGCTATG GGGATCCCTA TCTCGTTTTT AGGTTTGTTC
GAAGATAAAG ACGAGTTTTA CGATACTAAA ATTGGCCGCA ATGTGCGCGT TGCCCGTCAT
GCCTTAGCCA TAGATGAACA CCGCAGTGAT TTTGAGCCGA CTATTTGGCA ACTACGCGAC
AATATGGACA TGCAGCAAGT GTGGTTTGCC GGTGCCCATA GCAATATTGG CGGCAGTTAT
AAACCTGATA AAGACGGCTC ATTGCTGTCG GATATTGCAC TGTTGTGGAT GATATCCGAG
GCGCAGAAAT TTAATTTAAG CCTAGAGCCA CATTTAACGG CAAGTTTACA TCCTAATCCG
CTCGCGACTT TACATGACTC ACGGCGCAGT TTTTATCGGA TAAAGCAGGC GTACTTGCGG
CCACTGGATC CTTCGACTGT TCCTGTGTTA CTGCACCATT CAGTGAAAAT CCGCTGGGAG
CGAGACCCCC AATATCGGCC AAAAAATCTA AAAGTTTACT TGGATCGCTA TGGCTGGCCG
ACTGAGCTAA TCAATTAA
 
Protein sequence
MNKRIVICAD GTWNRPEKDL KVDFPTNVLR LARAISPLAS DGKPQQVFYD WGVGSYYDQT 
IGGATGRGLH KNIMDGYRYI VQNYSPGDEI YLFGFSRGAY TVRCLCGLIN NCGILKRPDA
ALIQQAFDHY KKSSAPFAPD GEKSLEFRAR YSHESREIKF VGVWDTVGAM GIPISFLGLF
EDKDEFYDTK IGRNVRVARH ALAIDEHRSD FEPTIWQLRD NMDMQQVWFA GAHSNIGGSY
KPDKDGSLLS DIALLWMISE AQKFNLSLEP HLTASLHPNP LATLHDSRRS FYRIKQAYLR
PLDPSTVPVL LHHSVKIRWE RDPQYRPKNL KVYLDRYGWP TELIN