| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2946 |
|---|
| Symbol | |
|---|
| ID | 5078173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 3418315 |
|---|
| End bp | 3419706 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640500146 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001184460 |
|---|
| Protein GI | 146294036 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTATG CAACAACCAA TCCCTTTACG GGAAAGCTCA TCAAAGAATT TCCAAATGCA
ACAGATACCG AAGTCACACA GGCGATAGAA TCCGCCCATC AGGCATTTTT AAGCTGGCGA
ACCACTCCCT TTGCCGACAA GGCCGCAATA CTGTCTAAGG CAGCGAAGAT CCTCAGAGAC
AACAAGTCCA AATACGCCAA TCTACTGACC TTAGAAATGG GCAAGGTCAC AGCAGAAGCC
GAAGCTGAAG TCGAACTGTC GGCGCAAATT TTCGAATACT ACGCCGAACA TGCCGAGCGA
CTGCTGGCAC CGCAAAAACT GCCGGTTGCC GATCCCGCCG AAGGTGAAGC GATACTGGTT
AACGAACCGC TGGGCGTATT ATTGGCTATC GAACCTTGGA ACTTTCCCTA CTACCAAATT
GCGCGCATCT TAGCGCCGCA GCTTGCCGCC GGAAATACCT TACTACTCAA ACATGCATCC
AACGTGCCCC AGTGCGCAGC GGCCTTTGAA GGCTTAATGC GCGATGCCGG ACTGCCCTCA
GGTGCATTCC AAAATCTGTA TGCCACCCGA GAGCAGATAG AACAGATCAT CAATTCGCCC
AAAGTGCATG GTGTTGCGCT CACGGGATCT GAAGATGCGG GATCGATCAT TGCCGCTCTG
GCGGGTAAGG CACTGAAAAA GTCCACCCTA GAACTGGGTG GCGCAGATGC CTTTATCGTA
CTTGAAGATG CCGATCTGCC TAAAACTATC GACTGGGCCG TGTTTGGCCG TCACTGGAAC
GCGGGACAGG TCTGTACATC ATCTAAGCGG ATGATCTTAG TTGAAGCCAT TTACGATGAA
TTTATGAAGG GTTATATCAA GGGGATAGAA GCGCTAAAAG CAGGCGATCC TATGGACTCG
GCCACTACGC TGGCACCACT GTCTTCCCAA GGCGCGGCCG ATGAGTTGAA GCAGAAGATC
CGTGATGCCG TAAAACACGG CGCAACCGCG ACCAAAGTGG GGCCTAAAGT ACCGCAGCAA
GGCGCCTTTG TGCAGCCAAC AATACTGACA AACCTGACGC CAGATAACCC CGCCTACTAT
TGGGAATTCT TCGGTCCTGT GTCCAGTATC CACAGAGTAA AAGATGAGCA AGCGGCGATT
GCCATCGCTA ATGACTCGCC TTTTGGATTG GGTGGCTCAG TGTTTACCGC CGATACCCAA
CGCGGGCTCG CGGTCGCTAA GCAGGTTTCC ACAGGCATGA TGTTTGTCAA TCATCCAACT
ATGGTCAAGG CCGACTTACC CTTTGGTGGG GTTCGCCGCT CAGGTTATGG CCGCGAGTTG
ATCGATTTAG GATTGAAAGA GTTTGTAAAC CACAAGCTGA TTAATGTGGT TGATATCAAC
GCACCTTTCT AA
|
|---|
| Protein sequence | MAYATTNPFT GKLIKEFPNA TDTEVTQAIE SAHQAFLSWR TTPFADKAAI LSKAAKILRD
NKSKYANLLT LEMGKVTAEA EAEVELSAQI FEYYAEHAER LLAPQKLPVA DPAEGEAILV
NEPLGVLLAI EPWNFPYYQI ARILAPQLAA GNTLLLKHAS NVPQCAAAFE GLMRDAGLPS
GAFQNLYATR EQIEQIINSP KVHGVALTGS EDAGSIIAAL AGKALKKSTL ELGGADAFIV
LEDADLPKTI DWAVFGRHWN AGQVCTSSKR MILVEAIYDE FMKGYIKGIE ALKAGDPMDS
ATTLAPLSSQ GAADELKQKI RDAVKHGATA TKVGPKVPQQ GAFVQPTILT NLTPDNPAYY
WEFFGPVSSI HRVKDEQAAI AIANDSPFGL GGSVFTADTQ RGLAVAKQVS TGMMFVNHPT
MVKADLPFGG VRRSGYGREL IDLGLKEFVN HKLINVVDIN APF
|
|---|
| |