Gene Sputcn32_2943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2943 
Symbol 
ID5078170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3414285 
End bp3415094 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content47% 
IMG OID640500143 
Productpeptidase M48, Ste24p 
Protein accessionYP_001184457 
Protein GI146294033 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0341999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA AACGATTAAG CTTGATGGTG ATCACTGTCA TGCTCGGATT ATCGGCCTGT 
GCAACCACAA AATCGCCAAC AGGAAGGGGT CAGACTCTGT TGTATTCATC AGCGCAAATG
CAGCAGATGG GTGATGCCTC TTTTGAAGAG ATGAAAAAGC AACTGAAGGT GAGTAACGAT
AAAAAGCTGA CACAATATGT TAATTGTGTG GCTAGCCGCA TTACGGCGGT ATTGCCAGAT
CAGACCCAAC GCTGGGATGT AGTATTGTTT GACTCTGAAC AGGTCAACGC GTTTGCCTTG
CCGGGAGGCC ATATCGGTGT TTATACCGGA TTACTTAAAG TCGCTAATGG TCCTGATCAG
CTTGCCACTG TTATTGGTCA CGAAGTTGCC CATGTACTGG CGCAACATGG GAACGAACAG
GTGTCCCGTG GGCAGTTAAC GGGCGTTGGC ATGCAAATAG CCGATGCAGC GTTGGGGGCG
AGTGGAGTGT CGAATCGTGA CTTGTATATG TCAGCTCTGG GGTTGGGTGC CCAAGTTGGG
GTTATTTTGC CCTTTGGTAG AGCCCAAGAA AGTGAAGCTG ATGTGATGGG GGTAGAGTTG
ATGGCGCGTG CAGGTTTTGA TCCCGCACAA AGTGTTGAAC TATGGCAAAA TATGTCGAAA
GCGGGAGGAA GCCAAGGTAT TGAATTGTTA TCGACTCATC CATCAAACAG CAACCGTATT
GCTCAGTTGC AACAACTTCA AAGCCAAATG CAACCGCTAT ATCAAAGCGC AAAGGTCAAT
GTTAAAAACC AGTGTGTTGC ACCTAAATAA
 
Protein sequence
MKSKRLSLMV ITVMLGLSAC ATTKSPTGRG QTLLYSSAQM QQMGDASFEE MKKQLKVSND 
KKLTQYVNCV ASRITAVLPD QTQRWDVVLF DSEQVNAFAL PGGHIGVYTG LLKVANGPDQ
LATVIGHEVA HVLAQHGNEQ VSRGQLTGVG MQIADAALGA SGVSNRDLYM SALGLGAQVG
VILPFGRAQE SEADVMGVEL MARAGFDPAQ SVELWQNMSK AGGSQGIELL STHPSNSNRI
AQLQQLQSQM QPLYQSAKVN VKNQCVAPK