Gene Sputcn32_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2942 
Symbol 
ID5078169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3413539 
End bp3414156 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID640500142 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_001184456 
Protein GI146294032 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.0729e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATA AATTCAGTAC TGTTGAACAG CAAGCAAGCT ACGGCGTAGG CCGTCAAATG 
GGTGAGCAAC TGGCCGCTAA TTCTTTTGAT GGTGTGGATA TCCCTGCCGT TCAAGCAGGT
TTAGCCGATG CGTTTGCGGG CTTAGAAAGT GCAGTATCTA TGCAGGACTT GCAAGTTGCC
TTCACTGAAA TCAGCGGTCG AATTCAAGCT GCTCAAGAGC AAGCTGCTGC AGCTGCGTCT
GCAGAAGGCG AAGCGTTTTT AGCGCAAAAC GCTAAGCGTG AAGGCGTAAC CGTGACTGAC
TCTGGTCTGC AATATGAAGT ATTAGTCCAA GGTAGTGGCG CGAAACCTAC TTACGAAGAC
ACAGTGCGTA CTCATTACCA TGGTTCTTTC ATCAATGGTG ATGTGTTCGA TAGCTCAGTG
GTACGTGGCC AACCGGCTGA GTTCCCAGTC TCTGGCGTAA TCGCTGGCTG GACTGAAGCA
CTGCAACTAA TGCCTGTAGG CACTAAGTTA AAGTTATATG TTCCACACCA TTTAGCTTAC
GGTGAGCGTG GTGCAGGCGC ATCAATTCCT CCGTACTCGA CCTTAGTGTT TGAAGTTGAG
TTGTTAGACA TCGTCTAA
 
Protein sequence
MSDKFSTVEQ QASYGVGRQM GEQLAANSFD GVDIPAVQAG LADAFAGLES AVSMQDLQVA 
FTEISGRIQA AQEQAAAAAS AEGEAFLAQN AKREGVTVTD SGLQYEVLVQ GSGAKPTYED
TVRTHYHGSF INGDVFDSSV VRGQPAEFPV SGVIAGWTEA LQLMPVGTKL KLYVPHHLAY
GERGAGASIP PYSTLVFEVE LLDIV