| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2911 |
|---|
| Symbol | |
|---|
| ID | 5078137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 3374133 |
|---|
| End bp | 3375440 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640500112 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001184427 |
|---|
| Protein GI | 146294003 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4268] McrBC 5-methylcytosine restriction system component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCG TGGTGGTGCG CGAATACGCA CGATTAACCA CCGCGCCACT GCCGCAAAAC
ACACTGGATG CGGCGCATAT TTCGCCGTCT GCGTTTAGCT GGCTGGTTAA GCTTGGCCAG
CAGTTTAAAG CCAATGGTTT GCAGCTGCTT GAGCTGGATG ATCAGCAGTG GCTGCGGTTG
GATAACTATG TCGGCGTGCT GGAATCACCC TGCGGTCAGG TGATTGAAAT ACTGCCCAAG
CACCGGGTTG AAGGCGAGTG CATTAATAGT GCCCGTAAGC TGCTACGCAA GCTGATATTA
AATGCTCTGC AACTTAAGCA GCGTGAAACC GAATACACCG ATATAGAGCG CTTTGATGCA
CCTTTAACCG AGTGGCTAAT GGCACAGTTT TTAACTGAGT TAGATAGCGT CATTAAGCGC
GGCATGCGCT TTGATTATCA GCGTATTGAA GAGTCACAGC GCTTTTTACG TGGCCAGTTA
GATGTAGTTA AGCAACTGCG CCAGCCGGCA GGACGCGAGC ATATCTTTAA TATTCGCCAT
GACATTTTTA CCGCAGACCG GGCTGAAAAC CGTTTACTTA AAACAGCACT GCTGCGGGTA
TGCAAAACAA CGCAGGATAA CGACAACTGG CGCCTTGCGC ATGAATTGCA AAGCCTGTTG
CATGAGCTGC CAACATCGAC TGATATTCAA GCTGACTTTA CCACCTGGCG TAGTGATCGC
TTAATGGCGC ATTACCAGGC CATAAAACCC TGGTGCGAGT TTGTACTAAG CCAGCATGTG
CCGCTGGCCG TACAAGGGCT ATGGCAAGGC ATTAGCATGC TGTTCCCGAT GGAGCGCTTA
TTTGAAAGCT ATGTCGCAGC TGAGCTTGAT GCTGCTGTGC AGCGTATGCT AGGCGTTAAA
GGTGAAGTGC GTACTCAGTT AGCCAGCAAG TATTTGTGCA AACACCAAGG AAAAGACTTC
TTCCAATTAC AACCAGACTT GCAACTTAAG CTAGGGGCCG ATCACTGGAT CCTCGATACA
AAATGGAAGC TGCTTGATGC ATCGGATAAA GAAAATAAGT ATGGCCTTAG CCAGCAAGAT
TTTTACCAGC TATTTGCTTA TGGCCAAACT TACCTGGGGG GTGACGGCAC GCTGGTACTG
ATTTACCCGG CCTGGCATAA ATTCCCTGCG GGTACCTATC TTGGCGAGTT TCGCTTTAAT
GATAAGCTAA CGCTGAAGGT ATTACCGTTT GATTTAGACG CACAAAATGC CGCTAAAGAC
TTGATTTCAA AGCTACAACA GGGTGTCAAA CAGAGTTTGC CGAGTTAA
|
|---|
| Protein sequence | MPAVVVREYA RLTTAPLPQN TLDAAHISPS AFSWLVKLGQ QFKANGLQLL ELDDQQWLRL
DNYVGVLESP CGQVIEILPK HRVEGECINS ARKLLRKLIL NALQLKQRET EYTDIERFDA
PLTEWLMAQF LTELDSVIKR GMRFDYQRIE ESQRFLRGQL DVVKQLRQPA GREHIFNIRH
DIFTADRAEN RLLKTALLRV CKTTQDNDNW RLAHELQSLL HELPTSTDIQ ADFTTWRSDR
LMAHYQAIKP WCEFVLSQHV PLAVQGLWQG ISMLFPMERL FESYVAAELD AAVQRMLGVK
GEVRTQLASK YLCKHQGKDF FQLQPDLQLK LGADHWILDT KWKLLDASDK ENKYGLSQQD
FYQLFAYGQT YLGGDGTLVL IYPAWHKFPA GTYLGEFRFN DKLTLKVLPF DLDAQNAAKD
LISKLQQGVK QSLPS
|
|---|
| |