| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2881 |
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| Symbol | |
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| ID | 5078628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3341705 |
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| End bp | 3343849 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640500084 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001184399 |
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| Protein GI | 146293975 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTATT TTGCTTTCCC AAAGCGCGTA GCGCTTTTAC TGGGCGCTTT CGTTGCGTTC
AATTCTCCAA TGGTGTTTGC CGCGAAGGAG CTTCAATCGA ATGAACAAGT TACCGATTCA
GATATTGAGC GTTTAAGTAT CCATTATCGT CAAGCCTACC GTGGTAATGT ACCCGCAGAG
GCGCTTCCCC AAGCGATTAG TGTTCTGGAT GAACAATTAA TAAAAGATGC GGGCCTGACA
AGGTTTCAGG ATGTTCTGGA TTATTCTGCC AGTGTAGCGC GGCAAAATAA TGGTGGTGGT
TTATGGGATA GTTTTTCTTT GCGCGGTTTT CCGGGCAATG AAAATATGCC ATCGGGTTAT
TTAATCAATG GCTTTAATGG TGGACGAGGC TTTAGTGGCC ATAGGGACTT GTCTAATGTT
GCCTATGTTG AGATTTTAAA AGGTCCTGGT TCGGCGCTTT ATGGGCGTTC TGAACCTGGT
GGCACAGTCA ATATCGTGAC TAAGAAACCC CAATATGAAA GCAGTGGTTA TTTAAAGGCA
TCGGCTGGGA GTTTCGACCA ATATCGGTTA GAAGGCGATG TGACCTCAGG TTTAACCGAT
AACTTGGCAT TTCGGATCAA TGGCGCTTGG CAGGAATACG ATAGTTTTCG TGATTATGTA
TTTAGTGATA AGAAAATCGT TACGCCTTCT GTACGTTGGC AGGTTTCCGA TAAAGCCTCA
TTACTCTATG AGCTTGAGTA TCTTAAACAG GAGCAGCTAT TCGATCGCGG CGTTATCGTA
CTTAATAACG ATATCAAGAC AGTGCCGCGC TCACGTTATC TAGGTGAGCC TAATGATGGC
GCAACGAAGG TGAATGCCAC TGGGCATCAA CTGACCTATG ACTATGAATT AAATGATGAT
TGGTCATTAA CGGCGGGTTA TAACTATCGC GATTCCACCT TAAAGGGATT TTCCTCCGAT
GCTGAGCTGG CAGCGGGGCG TCAATCCTTG TTTGATGATG GCCGAATACT GACTCGCCAG
CATCGATATA GGGATTATGC CTCAGAGGAT AATTCCCTTC GTCTTGAATT AAGTGGTCAT
CTTGATACGG GTTTTATTCG TCATAATTTG CTGCTTGGTG CCGATGCCTA CCACTACAAC
CTGAAGACGG GGCTTTATCG CTATCGAGGT AAAAAAGGCG AATATGCCAT CGATATTTTT
GAGCCGCAAT ATGGAAGTGC TCAACCTGAG GTGAGCTTAC TGTATGAGAA TGAGGAAACC
CAGAAGGCAT GGGGGTCTTA TCTTCAAGAT CAAATGGATT TAACTGAAAA GTGGAAATTA
CATCTAGGAC TGAGGTTCGA CACCTACCAG CAGGACATTA GTGAAACAGC TAAAGAGACG
CTATCGGAGC AAACCGATAA TCGGGTTAGC CCTAAAGTGG GTCTCGTCTA TTTGTGGTCA
GATGCATTAA GTTTTTATAG TTCTTACTCT GAAGGATTTT TACCGCTTTC GGGAACTGAC
TATGCGGGGA ATCCCTTTGA GGCTGAGGAG AGTAAATCTG TAGAGCTGGG CATGAAGTTT
AATGCTGCTT GGCTTAACGA CCTTGCCATA AATGGTAGTT TAGCCGTGTT TGATGCCAAA
AAGAGCAATA TTTTAACCTC AGATCCTGTG AATGTAGGGT TTTCGGCTAC TTTGGGGGAA
GCGAAAAGTA CAGGACTTGA ATTAGATATC GCGGCCGATC TGACTGAGTC ATTACAAGGC
AGACTATCCT ATGCCTATCT TAATACGCGT ACAGCCAACG ATACTTTGAA TCTTGACTTT
GGCGTACAAA TACCCGCAGG AAGTCCACTG GTTAACGTGC CTAAACAAAC CGCAAGTATT
CTGTTGAAAC AAGATCTCAA TGATTTTTCC ATTGATGGGC ATTTGGGATT AAGTTGGCGC
TATATTGATT CGCGCCTCGG CGATTCTGCC GATCCTAGTT TTCAATTGCC TTCTTATCAG
TTAGTTGGGT TGTTTATGAA CACCCACTTA AGCGACAACT TAAGCCTTGG TGTGAATCTG
GATAACATAC TGGATGAACA TTACATCGCG AGTAGCTATT CCGCTCTTTG GGCCGTGCCG
GGTGAGCCAC GTAGCATTAA AGTGAGTGTC AGCTATGAAT TCTAA
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| Protein sequence | MTYFAFPKRV ALLLGAFVAF NSPMVFAAKE LQSNEQVTDS DIERLSIHYR QAYRGNVPAE
ALPQAISVLD EQLIKDAGLT RFQDVLDYSA SVARQNNGGG LWDSFSLRGF PGNENMPSGY
LINGFNGGRG FSGHRDLSNV AYVEILKGPG SALYGRSEPG GTVNIVTKKP QYESSGYLKA
SAGSFDQYRL EGDVTSGLTD NLAFRINGAW QEYDSFRDYV FSDKKIVTPS VRWQVSDKAS
LLYELEYLKQ EQLFDRGVIV LNNDIKTVPR SRYLGEPNDG ATKVNATGHQ LTYDYELNDD
WSLTAGYNYR DSTLKGFSSD AELAAGRQSL FDDGRILTRQ HRYRDYASED NSLRLELSGH
LDTGFIRHNL LLGADAYHYN LKTGLYRYRG KKGEYAIDIF EPQYGSAQPE VSLLYENEET
QKAWGSYLQD QMDLTEKWKL HLGLRFDTYQ QDISETAKET LSEQTDNRVS PKVGLVYLWS
DALSFYSSYS EGFLPLSGTD YAGNPFEAEE SKSVELGMKF NAAWLNDLAI NGSLAVFDAK
KSNILTSDPV NVGFSATLGE AKSTGLELDI AADLTESLQG RLSYAYLNTR TANDTLNLDF
GVQIPAGSPL VNVPKQTASI LLKQDLNDFS IDGHLGLSWR YIDSRLGDSA DPSFQLPSYQ
LVGLFMNTHL SDNLSLGVNL DNILDEHYIA SSYSALWAVP GEPRSIKVSV SYEF
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