Gene Sputcn32_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2875 
SymbollipB 
ID5078622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3337127 
End bp3337786 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID640500078 
Productlipoate-protein ligase B 
Protein accessionYP_001184393 
Protein GI146293969 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00372643 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCTTGC AAGACACGAC TTTACATATC CGACATCTAG GAAAACAAGA TTACGAATCA 
GTTTGGCATG CCATGCAGCA TTACACTGAC ACTCGTAATA GTGAAAGCCC TGATGAACTG
TGGATAGTAG AACATCCACC CGTGTTTACC CAAGGCCAAG CAGGTAAGAG TGAACATATC
TTAAATGCTG GCGATATCCC CGTTATTCAA GTGGATCGCG GTGGTCAAGT GACATATCAC
GGCCCAGGGC AATTAGTGGT TTATCCTCTT ATTGATATCA AACGTAGTAA AATCGGCGTC
CGTCAACTCG TGACCCATAT AGAACAAAGC ATTATCAATA TGCTCGCTAA GTATGATATC
CAAGCCTACG CTAAGGCTGA TGCACCAGGC GTTTATGTTA ATGAACGCAA AATTGCCTCC
CTTGGATTGC GCATCCGCAG AGGTTGTTCA TTCCATGGAT TAGCCTTAAA TGTCGATATG
GACCTTGCCC CATTTCGCCG AATTAACCCT TGCGGTTATG CTGGCCTTGA AATGGTACAA
TCCAAAGCGC TTGGCGGACC GCAAACCGTG ACAGAAGCAG GCGAACAACT CACTATTACT
TTTAGCCAAT TATTGGGCTA CCAACATCTA GTTCATCATC AAGGATTAGC AGCGTCATGA
 
Protein sequence
MPLQDTTLHI RHLGKQDYES VWHAMQHYTD TRNSESPDEL WIVEHPPVFT QGQAGKSEHI 
LNAGDIPVIQ VDRGGQVTYH GPGQLVVYPL IDIKRSKIGV RQLVTHIEQS IINMLAKYDI
QAYAKADAPG VYVNERKIAS LGLRIRRGCS FHGLALNVDM DLAPFRRINP CGYAGLEMVQ
SKALGGPQTV TEAGEQLTIT FSQLLGYQHL VHHQGLAAS