| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2869 |
|---|
| Symbol | |
|---|
| ID | 5078616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 3330463 |
|---|
| End bp | 3332319 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640500072 |
|---|
| Product | peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_001184387 |
|---|
| Protein GI | 146293963 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000124923 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCCAA AAAAGCGGAT AACAATGCAT GATCACGCCG CCGAGGCGTC ACTCTTTAAG
CGCCGTGCGC TATTCACTTT TTGCTGTGTA GTCGCCCTAT TAAGCGTATT GGTGACCAAC
CTTTATCATC TACAGGTTGA ATCCTATAAG GATTATGAAA CCCGCTCTAA CGATAACCGT
ATTCGTGTTG TCCCTATCGC CCCCAGCCGT GGTTTAATTT ACGATAGAAA CGGTATACTC
CTAGCTGAAA ACCAACCCTT TTATTCCCTC GATCTTATCC CCGAAAAAAT CTCAAAAATG
CAAGAGACCT TAGATGAGCT AGGCAAGCTC ATTGAGATCA GCGAGGAAGA ACGAGAAAAC
TTTACCGAAG CGCTGAAATT TCATCGCCGC TTTAAACCGC TCACACTTAA AAATCAGCTT
ACTGAAGAGC AAGTGGCGAT TTTTAGTGTT AACCAGCACA GATTTCCCGG TATTTCTGTC
GAAGCAGGGC TAAAACGTAA TTATCCTTAC AATAGCCAAT TAACCCATGT GCTCGGTTAT
GTAGGAAAAA TTAATACCCG TGATCGCGCC CAGTTAGAAC GTAGTGATCT ATGGAAAAAC
TATGCTGCAA CCAAAGATAT TGGTAAGCAA GGGATTGAAA AGTTTTATGA ATCATTACTA
CATGGTATTC CGGGCCATCT CGAAGAAGAA GTGAACAACC GTGGCCGCAC AATCCGCACC
TTAAAAATTG TGCCGCCAGA GCCTGGGCAA GATATATATC TAACAATCGA TTTAAAACTG
CAGCAAAAGG CAGTGGAGTT ACTTCAAGGA CATAAGGGTT CTATTGTCGC GATAGATCCA
AGAGATGGCG GCATTTTAGC ATTAGTATCA AGCCCAAGTT ATGATCCAAA CCAATTTGTT
CAAGGTATTA ACAGCAAAGA TTACAATGAT TTACTCAATG ATAAATCTCG ACCTTTGATC
AACAGGGCAA CCCAAGGACA GTATGCCCCC GCATCAACGA TTAAGCCTAT GGTTGCCCTA
CTCGGCTTGG ATGAAAAAGT CGTTACTGAA CATACTCGCA TTTGGGATCC TGGATTTTGG
CAAATCCCAG GTGTAGAACG TAAATATCGC GATTGGAAGC GTTGGGGTCA TGGATGGGTT
AACGTCTATA GTGCGATTAT AGAATCCTGT GATACCTACT TTTATGAGTT AGCTTATAAA
GTTGGCGTCG ATGCCATTGC GCGTTTTATG GAACCTTTTG GCTTTGGACA AAATACCGGA
ATAGATATTT TTGAGGAATC CGCAGGTAAT ATGCCCTCTA AGGATTGGAA ACGCTTAAAA
TACAATCAAG CCTGGTATAT AGGTGACACC ATTTCAGTTG GGATCGGCCA AGGTTATTGG
ACAGCAACCC CATTACAACT GGCCAATGCT ACTGCCATTT TAGCCAATAA GGGGCGTCGT
TTTCAGCCGC ATTTACTCAA ATCTATCAAG GATAATACGG CAAAAATTGA CACTCCAGTT
AATGAGTTAC CGCCAATAGA ACTTAAGAAT GCTCGTAACT GGAATATTAT CAATGAAGCG
ATGCGCCAGA CGGCTCATAA ATCTCGTTTC ACCGATGCAA ACTATTCAGC TGCAATGAAA
ACAGGAACGG CTCAGGTAAT TGGCGTAGCT GAAAATACAA AATACGATGC GGATAAAATT
GCAGAACACT TTCGTGATAA TGCATTAGTG ATTGCTTACG CCCCCTTTGA AGATCCTAAA
ATCGTACTCG CAGTCGTCAT GGAAAACGCG GGTTGGGGTG GTGCGAATGC AGGTCCAGTT
GCTCGTGCCA TGCTGGATGA ATACATGCTT AGAGACACTT GGAAACCAAC GCCATGA
|
|---|
| Protein sequence | MSPKKRITMH DHAAEASLFK RRALFTFCCV VALLSVLVTN LYHLQVESYK DYETRSNDNR
IRVVPIAPSR GLIYDRNGIL LAENQPFYSL DLIPEKISKM QETLDELGKL IEISEEEREN
FTEALKFHRR FKPLTLKNQL TEEQVAIFSV NQHRFPGISV EAGLKRNYPY NSQLTHVLGY
VGKINTRDRA QLERSDLWKN YAATKDIGKQ GIEKFYESLL HGIPGHLEEE VNNRGRTIRT
LKIVPPEPGQ DIYLTIDLKL QQKAVELLQG HKGSIVAIDP RDGGILALVS SPSYDPNQFV
QGINSKDYND LLNDKSRPLI NRATQGQYAP ASTIKPMVAL LGLDEKVVTE HTRIWDPGFW
QIPGVERKYR DWKRWGHGWV NVYSAIIESC DTYFYELAYK VGVDAIARFM EPFGFGQNTG
IDIFEESAGN MPSKDWKRLK YNQAWYIGDT ISVGIGQGYW TATPLQLANA TAILANKGRR
FQPHLLKSIK DNTAKIDTPV NELPPIELKN ARNWNIINEA MRQTAHKSRF TDANYSAAMK
TGTAQVIGVA ENTKYDADKI AEHFRDNALV IAYAPFEDPK IVLAVVMENA GWGGANAGPV
ARAMLDEYML RDTWKPTP
|
|---|
| |