Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2860 |
Symbol | |
ID | 5078607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3322654 |
End bp | 3323157 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640500063 |
Product | methylation site containing protein |
Protein accession | YP_001184378 |
Protein GI | 146293954 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCTTA ATGTCAATAA TAAAAAAACG GCAGGCTTTA CCCTGATTGA ACTGGTTATA GTCATTATTG TCCTTGGTAT TTTGACGGTA ATCGCCGCAC CGAAATTTAT TGGCTTAAGC AAAGAAGCTC GGGAGAAAAC CTTGCTCCAA CTTCAGGCCA GTGTCAAAAC AGCAAATACG TTAGTCTATT CTAAAACCCA AATGCCCAGC CTTAAGAGCC AAGCAGTAGT GAATCGTGAC GATATTATTG ATATCGATTT AGATGGTGAT GGTACGGCAG AGACGCGTCT TAAATGGGGT TATCTTGATA ATACCGATGT AGAAAAATGG ATTACATCAG ATGATAAGCT CATTATTCAG TATCAAGGGA TTGATATCAC TTATATAGGT TACGATCTTA ACAACAATAC CTTAGTGAAT GATGATCAAT GTTATTTCCG TTATACTCAG GCAACGGATG CCAATACCCC ACCTCTGTAT GATCTCAATC TACAAGGCTG TTAA
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Protein sequence | MYLNVNNKKT AGFTLIELVI VIIVLGILTV IAAPKFIGLS KEAREKTLLQ LQASVKTANT LVYSKTQMPS LKSQAVVNRD DIIDIDLDGD GTAETRLKWG YLDNTDVEKW ITSDDKLIIQ YQGIDITYIG YDLNNNTLVN DDQCYFRYTQ ATDANTPPLY DLNLQGC
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