Gene Sputcn32_2842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2842 
SymbolrrmJ 
ID5078676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3303365 
End bp3303994 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content48% 
IMG OID640500038 
Product23S rRNA methyltransferase J 
Protein accessionYP_001184360 
Protein GI146293936 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.46393e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGTA AAAAACGTAC GGCCAGTTCC AATCGCTGGA TGCTGGAACA CTTTGATGAT 
CATTATGTCA AACTAGCACA GAAACGGGGA TTGCGTTCTC GCGCTGCGTT TAAGCTTGAA
GAACTTCAGC AAAAGGATCA ACTTATTCGC CCTGGTATGA CGGTAGTCGA CCTGGGAGCA
GCACCAGGTG GCTGGTCACA GGTAGCGGTT AAGTTGGTTG GAGATAGGGG AAAGGTTATC
GCCTGTGATA TTTTACCCAT GGATCCCATC GTTGGGGTAG ACTTTTTGCA AGGGGATTTT
CGTGAAGAAA AAGTCCTTGA AGCATTGCTT ACCCGCGTCG GTGCAGATAA GGTTGACGTT
GTGTTGTCAG ACATGGCGCC TAACATGAGT GGTTCAGACG GTGTCGATCA ACCGCGTGCT
ATGTATTTAG TGGAACTCGC CTTAGATATG TGTCATCAAG TATTGGCACC TAATGGGAGT
TTTGCGGTGA AAGTCTTTCA GGGGGAGGGC TTTGACGAAT ACATGAAAGC GGTTAAAGAA
GCGTTTAAAG TAGTTAAAAC ACGTAAACCG GACTCTTCGC GGGCGCGTTC CCGGGAAGTC
TATCTTGTGG CGACAGGGTA CAAGTTGTAG
 
Protein sequence
MSGKKRTASS NRWMLEHFDD HYVKLAQKRG LRSRAAFKLE ELQQKDQLIR PGMTVVDLGA 
APGGWSQVAV KLVGDRGKVI ACDILPMDPI VGVDFLQGDF REEKVLEALL TRVGADKVDV
VLSDMAPNMS GSDGVDQPRA MYLVELALDM CHQVLAPNGS FAVKVFQGEG FDEYMKAVKE
AFKVVKTRKP DSSRARSREV YLVATGYKL