Gene Sputcn32_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2838 
Symbol 
ID5078672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3297922 
End bp3298704 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content46% 
IMG OID640500034 
Producttriosephosphate isomerase 
Protein accessionYP_001184356 
Protein GI146293932 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.4878e-07 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTCA GACGTCCTAT GGTAGCTGGC AATTGGAAGA TGAACGGCAG TGCAGCATTA 
GCACAAGAGT TGTTCAAAAA ATTTGCCTCT AAGCTCCAAA ATGATTCAGC TGAAGTGGTT
TTATGCCCGC CTTCTATCTA TCTAGAGAGC GTTAGGCAAC TGCTAGAAGC AAACAAGGAA
GCGTTAGACG GTTCACTTGT TAGGATGGGC GCACAAAACC TAAGTCAACA CGACTTTGGC
GCTTATACCG GAGAAGTTTC AGGTCAGATG CTAAAAGATT CAGGATGTCG ATATGTGATT
ATCGGACATT CAGAACGTCG CCGTATGTAC GGAGAGACGA GTAATATTGT AGCGGAGAAA
TTCGCCGCTG CACAAAAGCA CGGCTTAACC CCAATATTGT GTGTGGGAGA GTCAGGTCCA
GCGCGTGAAG CAAGACGTAC CTTCGAGGTA ATTGCGGAAG AGTTGGATAT AGTGATCCAG
AAAAATGGCA CTATGGCTTT TGATAACGCC ATTATCGCCT ACGAGCCACT ATGGGCTGTA
GGGACAGGTA AAAGCGCTAC ACCAGAGCAG GCACAAGAAG TTCATGCGTT TATTCGCAAA
CGTCTCTCTG AGGTATCTCC ATTTATCGGA GAAAATATCA GGATTCTCTA CGGTGGTAGT
GTGACGCCGA GTAATGCTGC AGATTTATTT GCCCAACCTG ATGTTGATGG TGGACTGATT
GGCGGTGCTA GCTTAAACTC TAGCGAGTTT TTAAGTCTGT GTACCATAGC GATGAGCGCA
TAA
 
Protein sequence
MALRRPMVAG NWKMNGSAAL AQELFKKFAS KLQNDSAEVV LCPPSIYLES VRQLLEANKE 
ALDGSLVRMG AQNLSQHDFG AYTGEVSGQM LKDSGCRYVI IGHSERRRMY GETSNIVAEK
FAAAQKHGLT PILCVGESGP AREARRTFEV IAEELDIVIQ KNGTMAFDNA IIAYEPLWAV
GTGKSATPEQ AQEVHAFIRK RLSEVSPFIG ENIRILYGGS VTPSNAADLF AQPDVDGGLI
GGASLNSSEF LSLCTIAMSA