| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2828 |
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| Symbol | |
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| ID | 5078660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3285117 |
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| End bp | 3286022 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640500022 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_001184346 |
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| Protein GI | 146293922 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000420478 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTTA AAATTAGAAC CGCGGTTGTT GCTGTGCTGG CGGGTGCCAG CCTGATGTTG
GCTGGATGTG CGACGACCAC TCAGTCCCCT TTAGATAACC ACAATGATCT TGAAGGCAAG
TTAGTCGTAG CGCCTGTGAT GCCTGACTAT AAAGTCGAGG TCACACTCGC TAAGCTTAAT
GAGATTTTAT CTGCCGTCGA ACTGACAAAT GAACAGAGAG CCAGATTTCA TTATGATCGC
GGCGTAATAT ACGACAGTGT AGGTTTAAGG CTATTGGCGC GTATCGATTT TATGCAAGCA
CTTAAACTGC AGCCAGATCT TGCTGACGCT TATAATTTTC TTGGTATTTA TTATACCCAA
GAGGGCGAGT ATGACAGCGC CTATGAAGCT TTCGATGGCG TATTGGAACT TGCTCCTAAT
TACGATTATG CCTATCTAAA CCGTGGGATA GCACTTTACT ATGGCGATCG AAATGCGCTT
GCCATTAAAG ATATGCAAGC CTTTTATGCT GGTGATAATA AAGACGGTTA TCGTGCATTG
TGGTTATATT TGATAGAGTC CAAAGATAAT CACGAACAAG CCAAACAGCG GTTATTAGAA
AATCGTAAGA ATCTTGATAA CGGAGTATGG TCAACGGTTA TTGTCGATTA TTATTTAGGA
CACAAGCGCC GTGATGATGT GTTTAATGCA GCCAAAGAAG GTTTAACTCA TCCAAAAGAA
TATGCAGAGC GTTTATGTGA AGCGTATTTT TATCTTGCAA AAATGGCGAT AGAGCAAAAG
CAATATCAAG ATGCAGCAAA TTACTTACGG CTTACACTCG CGACTAATAT CTATGATTTT
GTTGAACACA GATATGCCCG TATTGAGCTA GCAAAAGTTA AAGGTTTGCT CGAAGACACA
AAATAA
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| Protein sequence | MSLKIRTAVV AVLAGASLML AGCATTTQSP LDNHNDLEGK LVVAPVMPDY KVEVTLAKLN
EILSAVELTN EQRARFHYDR GVIYDSVGLR LLARIDFMQA LKLQPDLADA YNFLGIYYTQ
EGEYDSAYEA FDGVLELAPN YDYAYLNRGI ALYYGDRNAL AIKDMQAFYA GDNKDGYRAL
WLYLIESKDN HEQAKQRLLE NRKNLDNGVW STVIVDYYLG HKRRDDVFNA AKEGLTHPKE
YAERLCEAYF YLAKMAIEQK QYQDAANYLR LTLATNIYDF VEHRYARIEL AKVKGLLEDT
K
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