| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2823 |
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| Symbol | |
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| ID | 5080796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3279760 |
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| End bp | 3280599 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640500017 |
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| Product | nucleoside-specific channel-forming protein, Tsx |
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| Protein accession | YP_001184341 |
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| Protein GI | 146293917 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000597906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACG TTAAAACTTT AGCTTTAGCC GCTACCGCAG TAGCAGCAAT CTCTGGTAAC
GCATTTGCCG CAGACCGTAC AGACCTTCAC GGTTCTGATT ACAAGTGGAT GCAGTTCAAC
GCTATGTACT CTATCGGTGA AAAACCTGAT AACCCAGCGT CTGGCGATCA ACACAACTAC
TTAGAAATGG AGTTTGGTGG TCGTTCAGGT ATTTTCGATC TTTATGGTTA TGTTGATATT
TTCAACTTAG CGAATGAAAA AACTAGTAAT GGCGACAAGA ACCCAGGTTC TGGCACTAGT
AAGTTATTTA TGAAGTTTGC CCCACGTGTA TCTATTGATG CATTAACGGG TAAAGATTTG
TCTTTCGGCC CAGTACAAGA AGTTTACTTC TCTACTCTAT TCAACTGGGA CGGCCTAAAC
GGTGATGGCG TTAACTCCAC ATTCTGGGGT GTTGGTGCCG ATGTAAACGT ACCTTGGTTA
GGCAAAACGG GTATGAACCT CTATGGTTTT TACGATATGA ACGCAAAAGA ATGGAACGGT
TACCAATTCT CTGCGAACTG GTTTAAGCCT TTCTATTTCT TCGACGATAA GAGCTTCCTA
TCATTCCAAG GTTATATCGA TTACCAATTT GGTGCTGACG CAGATAAAAC GGCTTTCGTA
CCAAAAACCT CTAACGGTGG TAACATCTTC TTCGGTCTAT ACTGGCACTC AGATCGTTAT
GCTCTGGGCT ATGGTCTAAA AGGCTTCAAA GACGTTTATT TGCTAGAAGA TGGTGCTGGT
GCCCTAGCAC TAGAATCAAC AGGTTGGTCA CACTACCTGT CTGCAACTTA CAAGTTCTAA
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| Protein sequence | MKNVKTLALA ATAVAAISGN AFAADRTDLH GSDYKWMQFN AMYSIGEKPD NPASGDQHNY
LEMEFGGRSG IFDLYGYVDI FNLANEKTSN GDKNPGSGTS KLFMKFAPRV SIDALTGKDL
SFGPVQEVYF STLFNWDGLN GDGVNSTFWG VGADVNVPWL GKTGMNLYGF YDMNAKEWNG
YQFSANWFKP FYFFDDKSFL SFQGYIDYQF GADADKTAFV PKTSNGGNIF FGLYWHSDRY
ALGYGLKGFK DVYLLEDGAG ALALESTGWS HYLSATYKF
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