Gene Sputcn32_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2798 
Symbol 
ID5080771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3249659 
End bp3250639 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content41% 
IMG OID640499992 
Productputative CheW protein 
Protein accessionYP_001184316 
Protein GI146293892 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAA TTAAAAAATC AGAAATATTG ACTGAAAGTG GCACTAATGA ACTCGAAATT 
ATTGAGTTTC ATCTGCATAA AGTCCTGCCT AACGGTGGGC ATAAAGTGTG TCATTACGGT
ATTAATGTCG CCAAAGTGAG AGAAGTGATT AGGGTGCCCG AAACCTCAGA TTACCCCAAT
GCCCAGCGGC ATATGGTTGG GGTGTTTTCG CTGCGAGAAA AGCTGATCCC TTTAGTCGAT
CTTGCTGGTT GGTTAGGGAT ACCAACCCCT GCGGATTTAA GTCATAAAGT CGTTATTGTT
ACCGATTTTA ATAAAATGAT TAATGGTTTT TTAATTGATA GCGTTCGTAG TATTCATCGA
GTGTCGTGGG AGCAGGTTGA ATCACCGAGT CAATTTTTAG AAGCCGGTGA AAATGATTGT
GTCGTTGCCG TAGTTCGTCG TGATGGCATG CTCATTATGA TCTTGGATTT TGAGAAAATT
ATTGCCGACA TTAATCCTGA ACTGAGTATG GATAAGTACG ATGTCACGCT CGATAGGAGT
GTCGTGATTA ATGACAAAAT GCTGGCAAAA CGTGAAGCAA AAACGATTTT AATTGTCGAT
GATTCTGCTT TTATTCGTAA GATGATCGAA AATACCCTTC GCAGCGCAGG TTACAACATT
ATCACAGCCA AAGATGGTGG TGATGCCCTT GAAATGCTAA TGGAATTTGA GACCCTTGCT
GATCAAGATA ATGCCTCTAT TTCTGATTTT GTCAGCGCCA TTATTACGGA TGTTGAGATG
CCTCGCATGG ATGGCATGCA TTTGGTGAAA CGCTTAAGAG AATCTAAGGC GTACCGACAA
ATGCCGATTG TGATGTTTTC ATCTCTCATG AGTGAAGATA ACCGTATTAA AGCTATCTCA
TTAGGGGCAA ATGATACTAT CACTAAACCC GAAATTGGCC GTTTAGTCGG TATGATGGAT
AAGTATGTAT TTGAAGAGTA A
 
Protein sequence
MNEIKKSEIL TESGTNELEI IEFHLHKVLP NGGHKVCHYG INVAKVREVI RVPETSDYPN 
AQRHMVGVFS LREKLIPLVD LAGWLGIPTP ADLSHKVVIV TDFNKMINGF LIDSVRSIHR
VSWEQVESPS QFLEAGENDC VVAVVRRDGM LIMILDFEKI IADINPELSM DKYDVTLDRS
VVINDKMLAK REAKTILIVD DSAFIRKMIE NTLRSAGYNI ITAKDGGDAL EMLMEFETLA
DQDNASISDF VSAIITDVEM PRMDGMHLVK RLRESKAYRQ MPIVMFSSLM SEDNRIKAIS
LGANDTITKP EIGRLVGMMD KYVFEE