Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2798 |
Symbol | |
ID | 5080771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3249659 |
End bp | 3250639 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640499992 |
Product | putative CheW protein |
Protein accession | YP_001184316 |
Protein GI | 146293892 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAA TTAAAAAATC AGAAATATTG ACTGAAAGTG GCACTAATGA ACTCGAAATT ATTGAGTTTC ATCTGCATAA AGTCCTGCCT AACGGTGGGC ATAAAGTGTG TCATTACGGT ATTAATGTCG CCAAAGTGAG AGAAGTGATT AGGGTGCCCG AAACCTCAGA TTACCCCAAT GCCCAGCGGC ATATGGTTGG GGTGTTTTCG CTGCGAGAAA AGCTGATCCC TTTAGTCGAT CTTGCTGGTT GGTTAGGGAT ACCAACCCCT GCGGATTTAA GTCATAAAGT CGTTATTGTT ACCGATTTTA ATAAAATGAT TAATGGTTTT TTAATTGATA GCGTTCGTAG TATTCATCGA GTGTCGTGGG AGCAGGTTGA ATCACCGAGT CAATTTTTAG AAGCCGGTGA AAATGATTGT GTCGTTGCCG TAGTTCGTCG TGATGGCATG CTCATTATGA TCTTGGATTT TGAGAAAATT ATTGCCGACA TTAATCCTGA ACTGAGTATG GATAAGTACG ATGTCACGCT CGATAGGAGT GTCGTGATTA ATGACAAAAT GCTGGCAAAA CGTGAAGCAA AAACGATTTT AATTGTCGAT GATTCTGCTT TTATTCGTAA GATGATCGAA AATACCCTTC GCAGCGCAGG TTACAACATT ATCACAGCCA AAGATGGTGG TGATGCCCTT GAAATGCTAA TGGAATTTGA GACCCTTGCT GATCAAGATA ATGCCTCTAT TTCTGATTTT GTCAGCGCCA TTATTACGGA TGTTGAGATG CCTCGCATGG ATGGCATGCA TTTGGTGAAA CGCTTAAGAG AATCTAAGGC GTACCGACAA ATGCCGATTG TGATGTTTTC ATCTCTCATG AGTGAAGATA ACCGTATTAA AGCTATCTCA TTAGGGGCAA ATGATACTAT CACTAAACCC GAAATTGGCC GTTTAGTCGG TATGATGGAT AAGTATGTAT TTGAAGAGTA A
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Protein sequence | MNEIKKSEIL TESGTNELEI IEFHLHKVLP NGGHKVCHYG INVAKVREVI RVPETSDYPN AQRHMVGVFS LREKLIPLVD LAGWLGIPTP ADLSHKVVIV TDFNKMINGF LIDSVRSIHR VSWEQVESPS QFLEAGENDC VVAVVRRDGM LIMILDFEKI IADINPELSM DKYDVTLDRS VVINDKMLAK REAKTILIVD DSAFIRKMIE NTLRSAGYNI ITAKDGGDAL EMLMEFETLA DQDNASISDF VSAIITDVEM PRMDGMHLVK RLRESKAYRQ MPIVMFSSLM SEDNRIKAIS LGANDTITKP EIGRLVGMMD KYVFEE
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