| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2788 |
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| Symbol | |
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| ID | 5080761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3237389 |
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| End bp | 3238558 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640499982 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001184306 |
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| Protein GI | 146293882 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0332558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAA AACCCCCTCT AGGGCTCGCT GTGCTGCTAA TGATATTTCC GCAAGCTATG
GAAACCATCT ATAGCCCAGC ATTGCCGAAT ATTGCAGAAA ACTTTGCCGT GTCGGTTGGT
GGCGCATCGC AAACCTTATC TGTGTACTTT ATTGCCTTTG CCATAGGCGT ATTTTGCTGG
GGCCGCTTAG CCGACATTAT TGGTCGCCGC AAAGCTATGC TCGCGGGATT AGTGTGTTAT
GCCATTGGCT CAGCATTAGC CTTGATGGTG AACGATTTTA GTCTGTTGTT GCTGGCCCGT
GTATTGTCGG CCTTTGGTGC AGCAGTGGGT TCTGTGATTA CCCAAACTAT GATGCGTGAC
AGTTATAGCG GAGAAGAATT AGCCAAAGTC TTTTCTGTGA TGGGAATGTC ACTTGGAATT
AGCCCTGTTA TCGGATTGCT ACTGGGCAGC GTTCTCAGTG CGTATTGGGG ATATCAAGGT
GTGTTTGTCG CACTTATGGT TTCTGCCATA GTGCTGTTGT TTTTGTCGAT AAAATCGTTA
CCTGAAACCA AACCCGCACA TAGCCAGAAA ATAGCGATAG GTGAGTTAGC GATTAAGATG
CTTACCGACA GCGGGATTAT TAAGAACACC TTCTTGGTGG CAGCGTTTAA TCTGATGTGG
TTTAGCTACT TTTCACTGGC ACCATTTATG TTTGAGGCGC AAGGATTATC GACGCTTGCC
TTCGGAACTA GTGGCTTACT ATTAGGCTTT GGCGCATTCC TTGGCAGTTA TTTTAATAGA
ATATTGCTAG GTCGAGGCCA CACCAGCGTC TGGCTGATTC GCTTAGCCAG TGCAATCGCA
CTTGTCGGTG GATTGGGTAT TTGGCTATTT CAATCGACTG TAATAGGACT GAATAGTGTT
TACTTTTTAG CGCCTATGCT CTTGATTGTG ATTGCTTATG GGATCGCGAT TCCGAACATA
CTCAGCTCGG CTCTGGCAAA CTACCGTGCT TATGCTGGCT CTGCTGGCGC ACTCTTTGGA
CTGTTTTATT ATATTTTGCT CGGAGCGGCA TTGGGCTTTG TGGGCATGAT TAACCATCTC
GGAGGCGTCA TTACGTTGGC GGCATTGCTC TGTACTGGGC TCTGTATTCG CGTCAGTACC
GAGCAGGTTA TTAACTCATC TCAGGCATAA
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| Protein sequence | MNIKPPLGLA VLLMIFPQAM ETIYSPALPN IAENFAVSVG GASQTLSVYF IAFAIGVFCW
GRLADIIGRR KAMLAGLVCY AIGSALALMV NDFSLLLLAR VLSAFGAAVG SVITQTMMRD
SYSGEELAKV FSVMGMSLGI SPVIGLLLGS VLSAYWGYQG VFVALMVSAI VLLFLSIKSL
PETKPAHSQK IAIGELAIKM LTDSGIIKNT FLVAAFNLMW FSYFSLAPFM FEAQGLSTLA
FGTSGLLLGF GAFLGSYFNR ILLGRGHTSV WLIRLASAIA LVGGLGIWLF QSTVIGLNSV
YFLAPMLLIV IAYGIAIPNI LSSALANYRA YAGSAGALFG LFYYILLGAA LGFVGMINHL
GGVITLAALL CTGLCIRVST EQVINSSQA
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