Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2779 |
Symbol | nrdR |
ID | 5080752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3225362 |
End bp | 3225811 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640499973 |
Product | transcriptional regulator NrdR |
Protein accession | YP_001184297 |
Protein GI | 146293873 |
COG category | [K] Transcription |
COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.392187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTGTC CATTTTGCAG CGCGACAGAT ACTAAAGTCA TCGATTCCCG ATTAGTGGCA GAAGGCCATC AAGTGCGCCG TCGCCGAGAA TGCACCGAAT GCCATGAAAG ATTTACCACT TTTGAAGGCG CTGAGTTGGT CATGCCTCGA GTGATTAAGC GTGATGGTTC ACGCCAACCC TTCGATGAAG AAAAACTCCA AAGTGGAATG TTGCGCGCCG TTGAAAAACG TCCTGTGTCT ATGGATGAAA TCGAGCAAGC GCTCAGCAAA ATCAAATCCA CCCTGCGGGC CACGGGCGAG CGGGAAGTGC CGTCAGAAAT GGTAGGTAAC TTGATGATGG AACAATTGAT GAACCTCGAT AAAGTTGCCT ATATACGTTT TGCTTCCGTA TACCGCGCCT TCGAAGACGT GTCTGAATTT GGCGAAGCCA TCGCCAAACT GCAAAAGTAG
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Protein sequence | MHCPFCSATD TKVIDSRLVA EGHQVRRRRE CTECHERFTT FEGAELVMPR VIKRDGSRQP FDEEKLQSGM LRAVEKRPVS MDEIEQALSK IKSTLRATGE REVPSEMVGN LMMEQLMNLD KVAYIRFASV YRAFEDVSEF GEAIAKLQK
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