Gene Sputcn32_2779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2779 
SymbolnrdR 
ID5080752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3225362 
End bp3225811 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID640499973 
Producttranscriptional regulator NrdR 
Protein accessionYP_001184297 
Protein GI146293873 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.392187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTGTC CATTTTGCAG CGCGACAGAT ACTAAAGTCA TCGATTCCCG ATTAGTGGCA 
GAAGGCCATC AAGTGCGCCG TCGCCGAGAA TGCACCGAAT GCCATGAAAG ATTTACCACT
TTTGAAGGCG CTGAGTTGGT CATGCCTCGA GTGATTAAGC GTGATGGTTC ACGCCAACCC
TTCGATGAAG AAAAACTCCA AAGTGGAATG TTGCGCGCCG TTGAAAAACG TCCTGTGTCT
ATGGATGAAA TCGAGCAAGC GCTCAGCAAA ATCAAATCCA CCCTGCGGGC CACGGGCGAG
CGGGAAGTGC CGTCAGAAAT GGTAGGTAAC TTGATGATGG AACAATTGAT GAACCTCGAT
AAAGTTGCCT ATATACGTTT TGCTTCCGTA TACCGCGCCT TCGAAGACGT GTCTGAATTT
GGCGAAGCCA TCGCCAAACT GCAAAAGTAG
 
Protein sequence
MHCPFCSATD TKVIDSRLVA EGHQVRRRRE CTECHERFTT FEGAELVMPR VIKRDGSRQP 
FDEEKLQSGM LRAVEKRPVS MDEIEQALSK IKSTLRATGE REVPSEMVGN LMMEQLMNLD
KVAYIRFASV YRAFEDVSEF GEAIAKLQK