Gene Sputcn32_2773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2773 
Symbol 
ID5080840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3220201 
End bp3221172 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content50% 
IMG OID640499967 
Productthiamine-monophosphate kinase 
Protein accessionYP_001184291 
Protein GI146293867 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00271748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAAACT GTACAGTGAA AGAATTCCAA TTAATTGAAT GTTATTTTAG CAACCGCGGC 
CCCACTCGCC GTGATGTGAA GCTTGGCATC GGTGACGATT GCGCTTTAGT GCAACCTGCA 
GAAAACAAGT CGATTGCTAT CTCCTGTGAC ACCTTAGTCG AAAATGTCCA TTTCTTCCCC 
GATATGCCTC CTGCAGCCTT AGGTTATAAA GCCTTAGCGG TAAATTTATC TGATCTGGCA 
GCCATGGGCG CTGAACCTGC GTGGATGACG CTTGCCTTAA CGCTACCCGA AGTCGATGAA 
ACTTGGCTAA GTGGTTTTAG TGAAGGCTTG TTTGAAGCCG CCGAGTACTA TGGCATCGCC 
TTAATTGGTG GTGATACGAC TCGTGGTCCA CGGGCGATTA ACATCACAGT GCACGGCCAA 
GTCCCACAGG GTAAGGCACT CACTCGTCAT GGTGCTAAAG TGGGAGATTG GATCTATGTT 
ACTGGCACAC TCGGAGATTC GGCTTTAGGG CTAGATATTA TCCGCGGTGT GCAGCAGGCC 
AGAGCTGAGC ATAAAGAATT CCTGATTAAT CGCCATTATC GTCCAACACC AAGAGTTTTA 
GCGGGCCAAG CTTTGCGTTC GCTGGCCTCC AGTGCTATCG ACCTTTCCGA CGGGTTTATC 
TCGGATATAG GCCATATTCT TAAGGCTTCT GGTGTGGGAG CCATTGTCGA TGTGGCTAAT 
ATTCCTCTGT CCCGTGCGAT GCAAGATACC GTTAGTGAGG AGCATGCCTT AGGTTATGCG 
CTGACCGGTG GCGAAGATTA TGAACTGCTG TTTACGGTTC CTGAGTCCCA AAAGGGCGCG 
CTTGAGACCG CCTTGAGTCA TGCGGGGACA AAGTTTGTCC GTGTTGGCCA GATTTGTGCG 
GGCAGTAAAC TCAAGTTGCA ACGCAATGGT GAGCCGTTTA CGCCGCCGTA TCACGGTTTC 
GAGCACTTTT AA
 
Protein sequence
MPNCTVKEFQ LIECYFSNRG PTRRDVKLGI GDDCALVQPA ENKSIAISCD TLVENVHFFP 
DMPPAALGYK ALAVNLSDLA AMGAEPAWMT LALTLPEVDE TWLSGFSEGL FEAAEYYGIA 
LIGGDTTRGP RAINITVHGQ VPQGKALTRH GAKVGDWIYV TGTLGDSALG LDIIRGVQQA 
RAEHKEFLIN RHYRPTPRVL AGQALRSLAS SAIDLSDGFI SDIGHILKAS GVGAIVDVAN 
IPLSRAMQDT VSEEHALGYA LTGGEDYELL FTVPESQKGA LETALSHAGT KFVRVGQICA 
GSKLKLQRNG EPFTPPYHGF EHF