| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2755 |
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| Symbol | ispD |
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| ID | 5080822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3191294 |
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| End bp | 3192055 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640499949 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001184273 |
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| Protein GI | 146293849 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.312562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTATGG ATATCGCATT AGAAGAAAGA CCCCATTTAG AACATCAGCC GCAAATGATG
ATAAAAGCAA ATCCAGATCC CCAAAGCGTT GTCGCGATCG TGCCCGCAGC AGGAATTGGT
AGCCGCATGG GGGCCGATAA ACCCAAGCAA TATCTTGAGG TATTAGGTCA AAGTATTCTT
GCCCATACGT TAGATACACT ATTGTCGCAT CAACAAATCA CCCAAGTGAT TATTGCACTA
CATCCTAATG ACTCATTTTT TTACGCATTA CCACAAGCGC AACATCCAAA ACTTATCACA
GTGCTTGGTG GCGGTGAGCG TGCTGATTCA GTGTTGGCGG CGTTGATGAA AGCGCCTGAA
GATAGTTGGG CCTTGGTACA TGACGCAGCA AGGCCCTGTT TAACCTTGGT TGATATCGAT
AAATTACTTG TGTCACGTGC CGATTTCCCC CATGGGGCGA TATTGGCAAT GCCAGTGCGT
GATACGATGA AGCGTGCTAA TCAAAAAGGG GAAATAAGTG CAACTGTTTG CCGCGATAAT
TTATGGCATG CGTTGACGCC GCAATTATTT CCAACATCTG AGTTGAAAAT GCATCTTCAA
GCGGCAATCC TAGCTGGTGT AACGGTTACG GATGAAGCCT CTGCCATGGA ATGGGCAGGG
ATATCGCCGG GGCTGGTTTC TGGCCGTGCC GACAATATCA AAGTCACACA TCCCGATGAT
CTGGAGCTGG CTGAACTCTT TTTAATGCGC GTTGCAAAAT AG
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| Protein sequence | MRMDIALEER PHLEHQPQMM IKANPDPQSV VAIVPAAGIG SRMGADKPKQ YLEVLGQSIL
AHTLDTLLSH QQITQVIIAL HPNDSFFYAL PQAQHPKLIT VLGGGERADS VLAALMKAPE
DSWALVHDAA RPCLTLVDID KLLVSRADFP HGAILAMPVR DTMKRANQKG EISATVCRDN
LWHALTPQLF PTSELKMHLQ AAILAGVTVT DEASAMEWAG ISPGLVSGRA DNIKVTHPDD
LELAELFLMR VAK
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