Gene Sputcn32_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2721 
Symbol 
ID5079936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp3147888 
End bp3148469 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content42% 
IMG OID640499907 
ProductTetR family transcriptional regulator 
Protein accessionYP_001184239 
Protein GI146293815 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.236108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAATG CCGAGTTCGA CAGAGAACAA GTTCTTCGCG GTGCGATGAC AGCCTTTATG 
CATAAAGGTT ACACCAAAAC AAGCATGCAG GATCTTACCC AAGCGACGGG CTTACATCCG 
GGCTCTATTT ACTGTGCTTT CACCAACAAA CGTGGATTAC TTATTGCTGC CATCGAGCAG 
TATCAGCAGG ATAGAAACTT ACAATTTAAT CATTTCTTTG CAAGCGGTCA GGATGTACTC 
GCTAATCTTA AACATTACTT AGATGAAATT GTTGTTGAAT GTTTAAGCTG TGACAGTGGT 
CAAGCGTGCT TGCTTACCAA AGCATTGAAT GAAATAGCGG AGCAAGATCA TGAGATCCAA 
GGGATCATTA ACCAATATTT ACAATCTTGG CAACGGGCGC TCTCAGAGCA ATTTGAGACT 
GCTCAAGAAC AAAAAAAACT TAAAGGTGAA CGTAATAGCG AGCAAAGAGC TCAATACCTG 
ATGATGGGGA TATATGGTCT TAGAACGTTT GCCCATACAC ATCCAGAAGC CAAAACCTTA 
CAACAGCTCG CCAATCAACT CTTTATTGAA GTGTGTCAAT AA
 
Protein sequence
MRNAEFDREQ VLRGAMTAFM HKGYTKTSMQ DLTQATGLHP GSIYCAFTNK RGLLIAAIEQ 
YQQDRNLQFN HFFASGQDVL ANLKHYLDEI VVECLSCDSG QACLLTKALN EIAEQDHEIQ 
GIINQYLQSW QRALSEQFET AQEQKKLKGE RNSEQRAQYL MMGIYGLRTF AHTHPEAKTL 
QQLANQLFIE VCQ