| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2713 |
|---|
| Symbol | |
|---|
| ID | 5079928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3137857 |
|---|
| End bp | 3138294 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640499899 |
|---|
| Product | transcriptional regulator-related protein |
|---|
| Protein accession | YP_001184231 |
|---|
| Protein GI | 146293807 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG TAAATGCAAA TACACTTGTT GACAATTTTA TCCAGCTATA CCAAGCATTA
AACAAAGACA ATCTGCATTT GCTCGAGCGA GTTTACGATG ACAAGATTAT ATTTGCCGAT
CCTATGCATC AGATTATCGG TTTACCTGCA TTAACCCAGT ATTTCGCTAA GTTATATAAA
AACATCCAGC ATATTCAGTT TGATATTAAA GAAGTACAAC AGAATAACTC TCAGGCCTCA
CTATTTTGGC AAATGCAGTA TTCCCACCCC AAGTTAAATA AGGGGGAAAC TATTTTTGTC
GATGGTATGA GCCAACTGAG ATTCAATGAG AAAATCTTTT TCCACCGAGA TTACTTCGAC
CTCGGGCAAA TGCTATACGA GCACTTGCCT TGCATGGGGG GGCTAATTCG CTTACTTAAA
GATAGGGCGG CAAAGTAA
|
|---|
| Protein sequence | MTEVNANTLV DNFIQLYQAL NKDNLHLLER VYDDKIIFAD PMHQIIGLPA LTQYFAKLYK
NIQHIQFDIK EVQQNNSQAS LFWQMQYSHP KLNKGETIFV DGMSQLRFNE KIFFHRDYFD
LGQMLYEHLP CMGGLIRLLK DRAAK
|
|---|
| |