| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2686 |
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| Symbol | |
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| ID | 5079997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 3113827 |
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| End bp | 3114864 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640499868 |
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| Product | twitching motility protein |
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| Protein accession | YP_001184204 |
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| Protein GI | 146293780 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATCA CTGAGTTATT AGCTTTTAGT GTAAAACACA AAGCCTCGGA TCTACACCTC
TCTGCAGGGA TATCTCCCAT GATCCGTGTT GACGGTGAAG TGAGAAAAAT TAACCTACCA
GCGCTCGATC ATCGGGGCGT ACACAGCTTA GTGTACGATA TTATGAATGA TAAACAGCGC
AAGGACTTTG AAGAGCATTT AGAAATTGAT TTTTCGTTTG AAGTGCCCAA CTTAGCCCGT
TTTCGTGTAA ACGCATTTAA CCAATCCCGT GGTGCCGCCG CAGTATTTCG TACCATTCCC
AGTGATATAT TGTCACTTGA ACAACTTGGC GCACCGGAGA TATTCAAAAA AATTGCCAGT
TATCCGCGTG GTTTAGTGTT AGTCACTGGA CCGACTGGCT CGGGTAAGAG TACCACACTT
GCAGCAATGG TGGATTACAT CAATGAAAAC CGCCATGATC ATATCTTAAC CATTGAAGAC
CCAATTGAAT TTGTCCATCC TAATAAACAA TGTTTGATTA ACCAGAGGGA AGTTCATCGG
CATACACACA GTTTTAACGC TGCCCTCAGG AGTGCTTTGC GTGAGGATCC TGACGTAATT
TTAGTGGGGG AGATGCGAGA TCTTGAAACC ATACGTCTGG CGATGACCGC TGCAGAAACT
GGCCACTTAG TCTTCGGTAC TTTACACACA ACTTCAGCAG CGAAGACGAT TGACCGTGTG
GTGGATGTAT TTCCAGCAGG GGAGAAAGAC ATGGTACGCA CTATGTTATC TGAATCATTA
CAAGCGGTTA TTTCACAGAC GCTTATCAAA AAAATTGGCG GTGGCCGTGT CGCTGCACAC
GAAATTATGA TGGGAACACC TGCAATTCGT AACTTGATCC GTGAGGACAA AGTCGCACAA
ATGTACTCTG CCATTCAAAC TGGCATGGCT CATGGAATGC AGACTCTGGA GCAATGCCTG
CAAAATTTAG TTAATCGTGG CCTGATCACC CGCGAAGATG CCATGTCGAA AAGTTCAAAT
AAACAAGCCA CATTTTAA
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| Protein sequence | MEITELLAFS VKHKASDLHL SAGISPMIRV DGEVRKINLP ALDHRGVHSL VYDIMNDKQR
KDFEEHLEID FSFEVPNLAR FRVNAFNQSR GAAAVFRTIP SDILSLEQLG APEIFKKIAS
YPRGLVLVTG PTGSGKSTTL AAMVDYINEN RHDHILTIED PIEFVHPNKQ CLINQREVHR
HTHSFNAALR SALREDPDVI LVGEMRDLET IRLAMTAAET GHLVFGTLHT TSAAKTIDRV
VDVFPAGEKD MVRTMLSESL QAVISQTLIK KIGGGRVAAH EIMMGTPAIR NLIREDKVAQ
MYSAIQTGMA HGMQTLEQCL QNLVNRGLIT REDAMSKSSN KQATF
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