| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2680 |
|---|
| Symbol | |
|---|
| ID | 5079991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 3109457 |
|---|
| End bp | 3109786 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640499862 |
|---|
| Product | translation initiation factor Sui1 |
|---|
| Protein accession | YP_001184198 |
|---|
| Protein GI | 146293774 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins |
|---|
| TIGRFAM ID | [TIGR01158] translation initation factor SUI1, putative, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0244604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAG ATCCTAACGT ATCCTTAGTG TACAGTACCG ATAAAGGCCG TATTAGCCCA
GAATCAACTG CCAAAGCAAT ACCAGAATCA GATGGTATAG TTCGGATCCA CCGAGATAGT
AAGGGGCGTA AAGGCAAAGG CGTATCAATT ATCTCAGGAT TAGGGTTAGA TGAAACGGCA
CTAAAAACCC TTGCTCAAAC CCTTAAAAAA CAATGTGGTT GTGGTGGTAC AGTTAAGGAT
TTCACTATCG AGATACAAAC TGACAATCGA GAACAACTGA AACTGTTACT CGAAAAACAA
AACTACAAGG TGAAATTAGC TGGTAGTTAA
|
|---|
| Protein sequence | MKADPNVSLV YSTDKGRISP ESTAKAIPES DGIVRIHRDS KGRKGKGVSI ISGLGLDETA
LKTLAQTLKK QCGCGGTVKD FTIEIQTDNR EQLKLLLEKQ NYKVKLAGS
|
|---|
| |