Gene Sputcn32_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2677 
Symbol 
ID5079988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp3107254 
End bp3107907 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content43% 
IMG OID640499859 
Producthypothetical protein 
Protein accessionYP_001184195 
Protein GI146293771 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0757609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTTG AAATGCAAGA AACACAATTT ATTGGATTAC TATGGCTTGT TGGTATTCTT 
GCTGAAGCGA TGACGGGGGC CTTGGCGGCT GGGCGAAAGC AGATGGATTT GTTTGGGGTT 
GTGATCATTG GCTGCGCAAC GGCAATTGGT GGCGGTACCC TAAGAGATAT GATGTTAGGA 
AACTATCCTC TGATCTGGGT TGAGAATGTA CATTATCTTC TCGCCATAGC ATTTGCGTCT 
TTATTGACAG TCGCCATCGC GCCTGTGATG CGCTATTTGT CTAAACTTTT TCTTGCTATA 
GATGCTTTAG GGCTTGCGGT ATTTTCAATT GTTGGGGCAC AGAAAACGTT AATGTTGGGA 
TTCAGTCCCA CAATTGCGGT TGTGATGGGG TTGGTTACAG GTGTATTTGG TGGCGTAATT 
CGCGATATTT TGTGCAATCA AGTACCTTTG ATTTTTAAGA AGGAACTTTA TGCCGTTATT 
TCACTTTTAA CAGCTGGATT ATATATTACC CTCAAAGCCT ACCAGTTGAC GGAATGGATT 
AACCTTGTGA TTTGCCTTAG TATCGGCTTT AGTTTGCGGA TGTTGGCGCT ACGATACCAT 
TGGTCAATGC CTACATTTGA TTATCAAGCA AACAGTGATC AACAGTCCCA CTAA
 
Protein sequence
MTVEMQETQF IGLLWLVGIL AEAMTGALAA GRKQMDLFGV VIIGCATAIG GGTLRDMMLG 
NYPLIWVENV HYLLAIAFAS LLTVAIAPVM RYLSKLFLAI DALGLAVFSI VGAQKTLMLG 
FSPTIAVVMG LVTGVFGGVI RDILCNQVPL IFKKELYAVI SLLTAGLYIT LKAYQLTEWI 
NLVICLSIGF SLRMLALRYH WSMPTFDYQA NSDQQSH