| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2627 |
|---|
| Symbol | |
|---|
| ID | 5080680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3046554 |
|---|
| End bp | 3047258 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640499811 |
|---|
| Product | acylneuraminate cytidylyltransferase |
|---|
| Protein accession | YP_001184147 |
|---|
| Protein GI | 146293723 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
|---|
| TIGRFAM ID | [TIGR03584] pseudaminic acid CMP-transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTGG CGATTATTCC CGCACGAGGA GGAAGCAAGC GTATTGCGCA TAAAAATATT
CGCAATTTTA ATGGTAAGCC AATGATTTCG TATCCTATCA CTGCTGCTAT ACGTAGTGGG
TGCTTTGATA AAGTGATTGT ATCGACAGAC TCGATGGAAA TTGCCACTAT TGCTAAGTCT
TTTGGTGCTG AAATTCCTTT TATGCGTCCG ACAGAACTAG CTGATGATTT TGTAGGGACA
ACTCCTGTTG TACGTCATGC ACTTAATGAG TTAGTTTCTT TAGGCCATAT GGTGGATATT
TGTTGCTGTA TTTACGCAAC GACTCCTTTA CTTCAATACT CGTTTTTACG AGAGGCTGGT
GAGTTACTAG AATCGACCCC CAATCTTGAT TATGTGTTCT CAGCTTGCCG TTTTTCATTC
CCTATCCAAA GGGCTTTGCT GTTAGATGCT AATGGTGGAG TATTACCCTT TGATAACAAA
AGTATTAGTC AACGATCGCA AGATTTAGTT GAGACATATC ATGATGCTGG TCAGTTCTAC
TGGGGGAGAG CTAGTGCTTT TTTGAATGAG GAAACTCGAG TGTTTGGTGC TCGGTCTCGA
ATGAAACTCT TGCCCAATTA TATGGTTGCA GATATTGATA CCTTAGAGGA TTGGGAACGC
GCCGAGGTGT TATACGATGT ATTGAAAAAG CAAGGAAAGT TATGA
|
|---|
| Protein sequence | MRVAIIPARG GSKRIAHKNI RNFNGKPMIS YPITAAIRSG CFDKVIVSTD SMEIATIAKS
FGAEIPFMRP TELADDFVGT TPVVRHALNE LVSLGHMVDI CCCIYATTPL LQYSFLREAG
ELLESTPNLD YVFSACRFSF PIQRALLLDA NGGVLPFDNK SISQRSQDLV ETYHDAGQFY
WGRASAFLNE ETRVFGARSR MKLLPNYMVA DIDTLEDWER AEVLYDVLKK QGKL
|
|---|
| |