Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2599 |
Symbol | |
ID | 5080651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 3019552 |
End bp | 3020472 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640499782 |
Product | putative CheW protein |
Protein accession | YP_001184119 |
Protein GI | 146293695 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGTA TTCTTGATTC AGTCAACAAA CGAACTCAGC TCGTTGGCCA AAACCGTTTA GAGCTTTTGC TATTTAAGTT AAATGGTCGT CAGCGATTCG GGATAAACGT GTTTAAGGTG AAAGAGGTAC TGCAGTGTCC GCCGCTGACG ACTTTGCCTA AACTTAACGC CAATGTGAAG GGGGTTGCAC ATATTCGAGG TACAACAATT TCAGTTATTG ACCTCAGTGC GGCGACTGGT GGTCGTCCCT TAACGAGTAC TGAAAATTGC TTCATTATTA TTTCTGAATA TAACCGAAGT GTGCAGGGCT TTTTAGTCAG TTCTGTTGAG CGGATTATTA ACATGAACTG GGAGGCTATA ATGCCTCCTC CTCAAGGTGC CGGTCGTTAT TCTTACCTTA CAGCGGTGAC TGAAATTGAG GGGGAATTGG TTGAGATTTT AGATGTAGAA AAAATCTTAG ATGAAATCTC ACCGGTAAAA ACGGCGATTA GTGAAGAACT CAATGAGCAA CTAACCATCG ACCGTACGCA GCATTACCAT ATTATGGTTA TCGATGATTC CGCCGTCGCA CGTAAGCAAA TTATTCGCTC CTTAGAGTCT TTAAATTTGC AGATAGATAC GGCGAAAGAT GGTCGTGAAG CCCTCGATAA GTTAAAGGCT ATTGCCAGTG AAATGGATAA TGTTGCAGAT GAAATTCCAT TAATTATCTC TGACATTGAA ATGCCTGAAA TGGATGGTTA TACCTTAACG GCTGAAATCC GCGATGATCC AAAGCTTAAA CATATTAAAG TTGTGTTGCA TACATCACTC AGTGGGGTGT TTAACCAAGC TATGGTGCAA AAAGTAGGTG CTAATGATTT TATTGCAAAG TTTAACCCAG ATGAATTAGC AGCAGCAGTG AACAAGCATT TAAGTTTATA A
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Protein sequence | MSSILDSVNK RTQLVGQNRL ELLLFKLNGR QRFGINVFKV KEVLQCPPLT TLPKLNANVK GVAHIRGTTI SVIDLSAATG GRPLTSTENC FIIISEYNRS VQGFLVSSVE RIINMNWEAI MPPPQGAGRY SYLTAVTEIE GELVEILDVE KILDEISPVK TAISEELNEQ LTIDRTQHYH IMVIDDSAVA RKQIIRSLES LNLQIDTAKD GREALDKLKA IASEMDNVAD EIPLIISDIE MPEMDGYTLT AEIRDDPKLK HIKVVLHTSL SGVFNQAMVQ KVGANDFIAK FNPDELAAAV NKHLSL
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