Gene Sputcn32_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2587 
SymbolflgL 
ID5078276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp3007553 
End bp3008764 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content43% 
IMG OID640499770 
Productflagellar hook-associated protein FlgL 
Protein accessionYP_001184107 
Protein GI146293683 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTAT CATCCGCGCA GATCTTTAAT CAAAGCATTA CGAGTGTACT GCAAAAGCAA 
ACGGCAACTA GCAAGATCCT CGAACAGCTC AGTAGTGGCA AAAAAGTCAA TACTGCAGGT
GATGATCCTG TCGCGGCGCT AGGTATCGAT AACCTGAATC AACGCAATGC CTTAGTCGAT
CAATTTATGA AGAATATTGA CTACGCGACT AATCGATTAG CAGTAACTGA AAGTAAGTTG
GGGAGTGCCG AAAATCTGGC ATCTTCCATA CGTGAACAAG TTATGCGAGC GGTAAACGGC
ACACTCGCGG ATTCTGAGCG GCAAATGATT GCCGATGAAA TGAAAGGCAG CTTAGAAGAG
CTCTTATCTA TTGCCAATAG TAAGGATGAA TCTGGCAATT ATATGTTTTC TGGCTACAGC
ACGGATAAAG AGCCTTTTGC TTTCGATAAT TCTACACCAC CAAAGATAGT TTATAGCGGT
GATTCTGGTA TTCAAAATAG TTTAGTGCAG TCTGGTGTTG CACTGGGAAC TAATGTCCCT
GGCGATAGTG CATTTATGAA AGCACCTAAT GGACTTGGCG ATTATAGCGT CAATTATTTG
GCCAGTCAGC AGGGGGAATT TAGTGTTAAA ACGGCAAAAA TAGCTGATGC ATCAACTTAT
CTAGCTGATA CATATACATT TAACTTCATT GACAATGGCT TAGGTGGCAC AAATTTACAA
GTGCTTGACT CTGCCAATAA CCCAGTGGCT AACATCGCCA ATTTTGATGC GACTACCCCC
GTTAGTTTCA ATGGAATTGA AGTTAAAGTG TCTGGGAAAC CCAGTGCTGG CGATAGTTTC
ACCATGGAGC CTCAGGCTGA AGTCAGTATT TTCGATACTA TCAGTAGTGC AATCGCATTA
ATCGAGGATC CTAATTCTGC TAACACTCCG CAAGGTCGTG CGCAGTTGGC ACAGATATTG
AATAACATCG ATAGTGGCGT CAATCAGATC AGTTCTGCCA GAAGTGTGGC GGGAAATAAT
CTGAAAGCCG TTGAGAGTTA TAAAGAGACT CACACAGAGG AGAAAGTGGT GAATACATCT
GCTCTATCTC GACTTGAGGA TCTTGATTAC GCGTCAGCGA TTACGGAATT TGAAAAGCAG
CAGCTTGCAT TGAACGCAGT CTCTAGCGTG TTTAGTAAGG TGGGTTCTGT TTCCCTGTTT
GATTATATTT AA
 
Protein sequence
MRLSSAQIFN QSITSVLQKQ TATSKILEQL SSGKKVNTAG DDPVAALGID NLNQRNALVD 
QFMKNIDYAT NRLAVTESKL GSAENLASSI REQVMRAVNG TLADSERQMI ADEMKGSLEE
LLSIANSKDE SGNYMFSGYS TDKEPFAFDN STPPKIVYSG DSGIQNSLVQ SGVALGTNVP
GDSAFMKAPN GLGDYSVNYL ASQQGEFSVK TAKIADASTY LADTYTFNFI DNGLGGTNLQ
VLDSANNPVA NIANFDATTP VSFNGIEVKV SGKPSAGDSF TMEPQAEVSI FDTISSAIAL
IEDPNSANTP QGRAQLAQIL NNIDSGVNQI SSARSVAGNN LKAVESYKET HTEEKVVNTS
ALSRLEDLDY ASAITEFEKQ QLALNAVSSV FSKVGSVSLF DYI