| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2583 |
|---|
| Symbol | |
|---|
| ID | 5078272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 3003598 |
|---|
| End bp | 3004971 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640499766 |
|---|
| Product | flagellar hook-associated 2 domain-containing protein |
|---|
| Protein accession | YP_001184103 |
|---|
| Protein GI | 146293679 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1345] Flagellar capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAA CAGCGACAGG CATGGGGTCA GGTCTAGATA TTACTAATAT TGTTAAAGTA
TTAGTCGATG CCGAGAAAAC GCCCAAAGAA GCGATGTTTA ATAAAACAGA AGACAGTATC
AAAGCTAAGG TTTCTGCTAT GGGAACCTTG AAGAGTGCCT TGTCTGCGTT CCAAGATGCC
GTAAAAAAAC TGCAAACTGG CGATGCTTTA AATCAACGTA AGATATCCGT TAGTAATAGT
ACCTTTTTAA CCGCTACTGC AGATAAAACT GCTCAAGCGG GTAGTTATGG TATTAAAGTT
GAACAGCTTG CTGTCAACCA TAAGATTGCA GGAGCAAATG TTGCGAATCC TGCATCTGGT
GTTGGTGAAG GAAGCCTAGA TTTTGACATC AATGGAAAAA ATTTCTCTGT TGATATAGCC
GCAACAGATT CCCTTGATGC AATAGCCAAA AAAGTCAATA AAGCTTCTGA CAATGTGGGT
GTTACCGCAA CCGTAGTTAC CAGTGATGCT GGTAGTCGAT TGGTGTTTAG TTCCAATAAA
ACGGGTGAGG ATAATCAAAT CAATATTACT GCGACTGACA CTTCAGGCTC AGGGCTCAGT
GATATGTTTG ATGCCAGTAA TATTACAACA TTACAAGATG CCAAAAATGC AGTGATCTAT
ATTGATAACC AAAAAGTCAC TTCGCAAACT AATGAAGTTA AGAATGCAAT TTCTGGTGTT
ACGTTACAGT TAACTGAGGC AGATCTTTCC AAAACGACTA CAGTCAAAAT TGAGCAGGAT
ACTGATGCCG TTAAAACAAA TATTAAGGCT TTCGTAGACT CCTATAACAG TTTGATTAAT
TCTGTTAATA AGTTGTCATC TTACGATGTA GACAAAAAAA CGGCATCAGC ATTGCAGGGC
GACTCTATGA TCCGCTCAAT AGAATCCCAA CTTCGTAGTA TCTCGAGTGA GCGAATACCT
ACAGAGAATG GGGGGACTAT TGCGTTATAT GATATTGGGA TTAAAACAGA TCGAAATGGC
AATCTATCAA TTGACGACAC TAAGCTTTCA AAAGTAGTGT CTGAAGATAT GTCCAGTATT
GAAGCGCTAT TTGCTACCTC AGAAAAAGGC CTTGCAAATC GGTTTTATGA TGTATCAAAT
ACTTATGTAA AATCAAGAGG ACTGATTGCT GATAGACAGA CAAGCTATAC TAACCAGCAA
AGTAGGCTTG CTGACCAAAG GGAAGCCTTT ACTCTTAAAA TGGAACAGCT AACAGCGCGG
TTAACAAAAC AGTTTAATGC GATGGATCTT GTCGTTGGGC AACTGAACCA ACAGAGCAGC
GGCTTAGTTG ATCGTATAAA CTCTCTTCCA GGAGCCGTTA AAAAGAGTAG ATAA
|
|---|
| Protein sequence | MALTATGMGS GLDITNIVKV LVDAEKTPKE AMFNKTEDSI KAKVSAMGTL KSALSAFQDA
VKKLQTGDAL NQRKISVSNS TFLTATADKT AQAGSYGIKV EQLAVNHKIA GANVANPASG
VGEGSLDFDI NGKNFSVDIA ATDSLDAIAK KVNKASDNVG VTATVVTSDA GSRLVFSSNK
TGEDNQINIT ATDTSGSGLS DMFDASNITT LQDAKNAVIY IDNQKVTSQT NEVKNAISGV
TLQLTEADLS KTTTVKIEQD TDAVKTNIKA FVDSYNSLIN SVNKLSSYDV DKKTASALQG
DSMIRSIESQ LRSISSERIP TENGGTIALY DIGIKTDRNG NLSIDDTKLS KVVSEDMSSI
EALFATSEKG LANRFYDVSN TYVKSRGLIA DRQTSYTNQQ SRLADQREAF TLKMEQLTAR
LTKQFNAMDL VVGQLNQQSS GLVDRINSLP GAVKKSR
|
|---|
| |