Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2577 |
Symbol | |
ID | 5078266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2998040 |
End bp | 2998375 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640499760 |
Product | flagellar hook-basal body complex subunit FliE |
Protein accession | YP_001184097 |
Protein GI | 146293673 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1677] Flagellar hook-basal body protein |
TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.325302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAATAG GCGCAAATAC ATTTCTGCAA GAAATGCAGT CACTCAAAGG TGAAATAACA CCGTCTTTCG GTATCTCACC GAATATCATG CAGCAGGTAA ATAACACCAG TGGTGCCGAT TTCGGTCAGC TACTCTCGCA GGCTGTTGGC AATGTCAGCG GCTTACAATC AACGTCATCA AACTTGGCAA CGCGATTAGA GATGGGTGAC ACGACAGTGA GCTTGTCGGA TACTGTGATT GCCAGAGAGA AAGCCAGTGT GGCATTTGAA GCGACGGTAC AAGTGCGTAA TAAACTTGTC GAAGCTTATA AAGAAATAAT GAGTATGCCT GTTTAG
|
Protein sequence | MQIGANTFLQ EMQSLKGEIT PSFGISPNIM QQVNNTSGAD FGQLLSQAVG NVSGLQSTSS NLATRLEMGD TTVSLSDTVI AREKASVAFE ATVQVRNKLV EAYKEIMSMP V
|
| |