Gene Sputcn32_2565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2565 
Symbol 
ID5078254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2987378 
End bp2987647 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content41% 
IMG OID640499748 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_001184085 
Protein GI146293661 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCAG AAGCACTGAT TGATATATTT CGAGAAGCCT TAGCCGTTAT TGTGATGATG 
GTGTCGGCCA TTGTCTTGCC TGGGTTGGGT ATAGGGCTTG TTGTCGCAGT GTTTCAAGCT
GCCACTTCAA TTAATGAGCA AACCTTAAGT TTTCTTCCTC GATTATTGGT CACATTGTTT
GGACTGATGT TTATGGGGCA TTGGTTAGTT CAAACCTTAA TGGATTTTTT CATTGAGATG
GTTAACCGTA TTCCCCAAGT GATAGGTTAA
 
Protein sequence
MTPEALIDIF REALAVIVMM VSAIVLPGLG IGLVVAVFQA ATSINEQTLS FLPRLLVTLF 
GLMFMGHWLV QTLMDFFIEM VNRIPQVIG