| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2559 |
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| Symbol | fliA |
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| ID | 5078248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2980250 |
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| End bp | 2980963 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499742 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_001184079 |
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| Protein GI | 146293655 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.551623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAAAG CCGCAGCGTA TACTTGTTTA GACAATAAAT CGTCTATCGT TGAACAGTAT
GCTCCGTTGG TTAAAAGAAT TGCACATCAT TTACTCGCCA GACTGCCAGC TTCTGTGCAG
CTAGATGATC TACTACAAGC TGGGATGATG GGACTATTAG AAGCATCATC CAAGTTTGAT
GGTGGCAAAG GTGCAAAATT TGAAACCTTC GCTGGCATAC GGATCCGTGG TGCCATGCTG
GACGAAATTC GTCGAGGTGA TTGGGTTCCA CGTTCTGTTC ATCGTAATAA TCGTAGGGTA
GCACAAGCCA TTGATGAGTT AGAGCAAGAA CTGGGCCGTG ATGCACGTGA CACAGAAATT
GCAGAAAAAC TTGATATGAC GCTCGATGAG TACCATCATA TTCTTAACGA TGTTTCTGTC
GGAAAAATCA TAGGGATAGA AGACTTAGGT GTATCGCAAG ATATACTAAC GCTGAGCGAT
AGGTCCGACG ATGGCTCGTT TGAAGCTCTC GCTGAGACTC AGTTTCATTC CGCATTAGTT
GAGGCAATAA AATTATTGCC AGAAAGAGAT GCGTTAGTGT TATCGCTGTA CTACGATGAA
GCATTGAATT TAAAAGAGAT TGGCGCCATT CTTGAAGTAA GCGAATCGCG AGTTAGCCAG
ATATTAAGTC AGGCTATGTT GCGACTCAAA GCTAAGCTCA AGCACTGGAC ATAA
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| Protein sequence | MNKAAAYTCL DNKSSIVEQY APLVKRIAHH LLARLPASVQ LDDLLQAGMM GLLEASSKFD
GGKGAKFETF AGIRIRGAML DEIRRGDWVP RSVHRNNRRV AQAIDELEQE LGRDARDTEI
AEKLDMTLDE YHHILNDVSV GKIIGIEDLG VSQDILTLSD RSDDGSFEAL AETQFHSALV
EAIKLLPERD ALVLSLYYDE ALNLKEIGAI LEVSESRVSQ ILSQAMLRLK AKLKHWT
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