Gene Sputcn32_2543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2543 
Symbol 
ID5080887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2960057 
End bp2962816 
Gene Length2760 bp 
Protein Length919 aa 
Translation table11 
GC content43% 
IMG OID640499726 
Productpolysaccharide export protein 
Protein accessionYP_001184063 
Protein GI146293639 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.941823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTACAAC AAATCAAAAA ATTCATCATA GTTGGCCTTA GCGCCACGAT ATTGTTGGGC 
GCGCAGGCGC AAGCCGTTAC GCCCTCTCCG CAAATGATTG AGCAGTTCAA ACAACTTCCA
AAAGCGGAGC AGCAACGTCT TGCACGCCAA TATGGTATTG ATCCTAATAT GCTTTCTGGC
AACCAAGCGC AATCACAGCA ACTGGCTAAT CCTGAAGTCG TCACTAGCCG TGATATTAAC
GGCAATAACA ACTTTAATAA CAATGCTAAT AGCAACGACG CTCAAAAAGC GAAAGGAGAA
CTTAAGTTCA CCGAAGATAG CAGTAAGCTT GAACTGCGTC GTTTCGGTTA TGAAATGTTT
GCTGGTGAGC CTAGTACTTT TGCGCCTGTT TCCGATGTGC CTGTGCCTGG CGAATATCTT
GTTGGCCCTG GTGATAACAT CAAAGTGCAG CTTTATGGCA AAGAAAATAA AGAATACGAC
TTAGTGATTA GTCGCGACGG TGTCATTCAA TTTCCTGAAC TAGGACCAAT TCCGGTGATG
GGGTTGAGCT TCTCAGAACT TCGCGACTCG CTTTCACAGC GCATAAAGCA GCAGATGATA
GGTATTGAGT CGAATATTAC TATGGGGCAA TTGCGCTCAA TTCGTATTTT TGTCGCGGGT
GATGCCTATA AACCTGGCTC TTATACAGTT TCAAGCTTAT CAACCATCAC TCAAGCGTTG
TTTGTTGCTG GCGGTGTTAA CGAAATTGGC TCATTGCGTA ATATCCAACT AAAACGTAAT
GGCAAGTTAG TCGGTTCTTT CGATCTTTAC GACCTGTTAC TACGAGGCGA TGCATCGGGG
GATTTGCGCT TACAGTCTGG TGATGTGGTT TTTCTTCCTT CAATCGGTGG TTTAGTCAGT
GTATCTGGTG AAGTTCGCCG CCCAGCGATA TATGAACTCA AAAGCAATGA AACAATGGCA
GATGTGATTG CCATGGCTGC AGGGTTAAAG CCTGGCGCGT ATCCTAAAAG TAGTTCAATC
GAACGTTATA ACAATAAGTC TTTAAAAACG ATAATAAACG TAGATTTAAC AACAGAACAA
GGCCAAATGA CTCAGGCTAA AGCTGGTGAT GTTGTTAGAG TAAAAAGTGC ATCAGAACAA
TATGAAAGTG CGATAACGGT ACTCGGTGCA GTCGTGCGAC CTGGCAAATA CCAATGGTTT
TCGGGCCAGA AAGTGAGTGA TATTTTACCT TCGTTATGGG GTGATTTATC AGTATCGGCT
GATCTTGATT ACGCTTTGAT TATTCGTGAA GTTAATCAAT ATGGCGATAT TGAAGTACAG
CAATTTTCAC CTGGAAAAGC GATTGGCGCT AAAGATGCGC GTCAAGATTT GAACTTACAA
CCCCGTGATA AAATTATTAT TTTTAACTTT TCAGATGATG TACAAAATCG CTATGAGTTG
AATAAATTAG TCAAAGAGCG AGTCGAAAAA GTCACGTCGT TAAATACAAA TAACCTTTTA
GGATCGGATT TATTTAAAGC AGGATTTGTT CAGCTTGATA AAAGTCGATT AACACAACGC
TCTGAAATTG CAGGGGTTGT ACTTACGGAT AAAGTTGAAT CAGAAGATAT AGAAGTGGTT
AAAGGAGTGG TCAATAAAAT GTTGGCCAAC CTTTTTGATG ACAATGAGTT GCTTAAATTG
AGTAACCAAA TGGGTCGTCA AGAGCTACTT TATCCTGTAA TGATCAAGTT GAATAATCAA
GGGCGTGCAG GGGCGGGCAT TCAAATCGTT GCCATTAATG GACAAGTCCG TTTACCTGGC
GTTTATCCTT TAACAACGGG TTCTCGTGTC AGTGATTTAG TTGCCGCTGC AGGAGGATTA
AAAGAAGGCG CATATACGGT TAGAGCAGAA TTAACCTCTA CACGAGTGGA TGACTCAGGC
TCCAGTACCG AGCATCACAA TATTGAGCTT GGCTCCGCTT TACAAGGCAA CCAAAGTGCT
AACGTGCTTT TATCCGGTCG CGATATTCTT ACGGTAATGA CTACACCAGA TTGGCAAGAA
ACTAAAGTGG TTGAAATCCG TGGTGAAGTG AAATTCCCTG GCCGTTACAA CATTCGCCGT
GGTGAAACAT TAAGCCAGTT AATTACTCGC GTAGGTGGTT ATACCGAGTA CGCTTATTTA
CCCTCAGCGG TATTTGTGCG TGAGTCCGTC CGTCAGCAAG AGCAGATTGA AATTAAAAAG
TTAGCCGATC AACTTCGTCG TGATATTGCC ACCCGTGGTG TATCAAAAGA TGGAACAGTC
GTTAACTATT CCGATGCTCA GTTGATGTTG ACAGATCTTG AAAATATCAA AGCGGTGGGC
CGTTTGGTGG TTGATTTGCC CGCAATCAGC TTAGGCATTA AGCAGGCCGA TCTGCAATTA
GAAGATGCCG ATATTCTTTA TGTGCCATCG ACTAAACAGA CTATTGCTGT GATGGGTGAA
GTGCAGCATC CTGCCACCCA TAGATTTAAA GATGGCTTAA CCTTAGACCA ATATCTGGCG
ATGTCTGGTG GCGCCAGAGA AAGAGCCGAT GCTGGCCGCA CTTATATTAT TCAAGCAAAT
GGGTCAGTAT TAATGCCTAG CCGCTCAAGC TGGTTTAGCA GTGCAGATCA GTTACAACCC
GGTGATACTG TAATCGTCCC ACTTGATACT GAATATAAAG ATAACCTAAC GCTTTGGTCA
CAAGTGACAG GTATTATCTA TAACACTGCT GTTGCGATAT CCGCAATCTC AGGGTTATAG
 
Protein sequence
MLQQIKKFII VGLSATILLG AQAQAVTPSP QMIEQFKQLP KAEQQRLARQ YGIDPNMLSG 
NQAQSQQLAN PEVVTSRDIN GNNNFNNNAN SNDAQKAKGE LKFTEDSSKL ELRRFGYEMF
AGEPSTFAPV SDVPVPGEYL VGPGDNIKVQ LYGKENKEYD LVISRDGVIQ FPELGPIPVM
GLSFSELRDS LSQRIKQQMI GIESNITMGQ LRSIRIFVAG DAYKPGSYTV SSLSTITQAL
FVAGGVNEIG SLRNIQLKRN GKLVGSFDLY DLLLRGDASG DLRLQSGDVV FLPSIGGLVS
VSGEVRRPAI YELKSNETMA DVIAMAAGLK PGAYPKSSSI ERYNNKSLKT IINVDLTTEQ
GQMTQAKAGD VVRVKSASEQ YESAITVLGA VVRPGKYQWF SGQKVSDILP SLWGDLSVSA
DLDYALIIRE VNQYGDIEVQ QFSPGKAIGA KDARQDLNLQ PRDKIIIFNF SDDVQNRYEL
NKLVKERVEK VTSLNTNNLL GSDLFKAGFV QLDKSRLTQR SEIAGVVLTD KVESEDIEVV
KGVVNKMLAN LFDDNELLKL SNQMGRQELL YPVMIKLNNQ GRAGAGIQIV AINGQVRLPG
VYPLTTGSRV SDLVAAAGGL KEGAYTVRAE LTSTRVDDSG SSTEHHNIEL GSALQGNQSA
NVLLSGRDIL TVMTTPDWQE TKVVEIRGEV KFPGRYNIRR GETLSQLITR VGGYTEYAYL
PSAVFVRESV RQQEQIEIKK LADQLRRDIA TRGVSKDGTV VNYSDAQLML TDLENIKAVG
RLVVDLPAIS LGIKQADLQL EDADILYVPS TKQTIAVMGE VQHPATHRFK DGLTLDQYLA
MSGGARERAD AGRTYIIQAN GSVLMPSRSS WFSSADQLQP GDTVIVPLDT EYKDNLTLWS
QVTGIIYNTA VAISAISGL