Gene Sputcn32_2509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2509 
Symbol 
ID5080853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2919947 
End bp2921515 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content43% 
IMG OID640499692 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_001184029 
Protein GI146293605 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.17114e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTTA TGAGTTATGC CGATTCGGCA CTTTCTTTGC TGCCGCCTGC GGTAGCGATT 
GTATTGGCGA TTTTTACTCG CCGAGTTCTA CTTTCCCTTG GATTAGGAAT TGTCATTGGA
GCGTTATTGC TTAACCAATA CTCGCCTGTT GCCAGTGGAG CCTTTTTGTT CAGTAGTGTA
AAAGGTCTTT TTTGGGCTGA TGACGCTGCT AATACGTGGA ATTTATATAT TCTTGGTTTT
TTAATCGTAT TGGGAATGAT CACCGCATTA ATTACTGTTA GTGGTAGTGC CCGCGCATTC
GCCGATTGGG CTCGTTTGCA TATTCGTAAT AAGCGTGATG CAAAATTACT CACCATGTTT
TTAGGTTGTG TTGTTTTTAT TGACGATTAT TTCAATAGCT TAGTTGTGGG GTCTGTCGCA
AAACCCGTCA CAGATCGCTA TTATATTTCT CGCGCTAAGT TAGCGTATTT ATTGGATTCA
ACGGCGGCGC CCGTTTGTGT TATTTCACCA GTATCTAGCT GGGGAGCTTA TATTATTGCC
TTAATTGGCG GTATTTTAAC GGCTCATGGT TTTGCAGACT CTGGACATTT GAGCGTATTT
GTCCAAATGA TACCAATGAA CTTCTACGCT ATCTTCTCTT TGTTATTATT ACTTTGTGTT
GCGTTTATGG GACTCGATAT TGGGCCAATG CGTGAACATG AGTTAAATGC CCAACGGGGG
AATTTATACG ATGAAACAAA AGGATTACCC CCCGGAGCGA ACGCGGATTT ACCCGAGGCT
GAAACGGGTA AAATTTTAGG CTTATTCCTG CCGATCACTG TGCTGGTATT TGCAACCTTA
TATTTTATGA TTAGCAGCGG TGCTCAAGTG CTCGCCGCTG AAGGCATTGA GTTTAGTCTT
ATTTCAGCTT TTGAAAAAAC GGATGTGAGT TCATCATTAT TTTTGGGTTC CCTGTTCGGG
TTAGCCGTGG CTTTAGTGGT TAACGTGGTA CAAGGAGTCG AAAAGTCGAT GATTGTAAAA
GGTGTAGTGC AGGGCGCACG TTCTATGCTA CCCGCGATTT ATATTTTGTT ATTTGCATGG
ACAATTGCAG GGATTATTGG CCAACTCGAA ACTGGTAAGT TTATGGCGAG TTTAGCGACG
GGTAATATTC CTTTTGCTTT CTTACCTGCG CTTATGTTTA TTCTGGCGGG ATTAACGGCG
TTTTCTACGG GCACGAGTTG GGGAACTTTT GGTATTATGT TGCCGATTGC AGCCGATATG
GCGATGGGCA GCCATACTGG GATGATGTTA CCTATGTTGG CCTCTGTTTT AGCGGGTGCG
GTATTTGGCG ATCATTGTTC ACCTATCTCA GATACCACAA TTTTGTCGTC AACTGGCGCG
AGTTGTCACC ATATAGACCA TGTAGTCACT CAGTTACCAT ATGCCTTGAT AGTAGCGTTT
ATCAGCTTGG TGGGTTATTT GGTACTCGGG TTTACAGAGT CGGTCAGTGC AGGTTTAGTG
ACCTGTAGTG TGTTGTTGGT GATGAGTGTT ATTTGGCTGA GAATAAAATC AACAGGTGCA
GTGAAATAG
 
Protein sequence
MTVMSYADSA LSLLPPAVAI VLAIFTRRVL LSLGLGIVIG ALLLNQYSPV ASGAFLFSSV 
KGLFWADDAA NTWNLYILGF LIVLGMITAL ITVSGSARAF ADWARLHIRN KRDAKLLTMF
LGCVVFIDDY FNSLVVGSVA KPVTDRYYIS RAKLAYLLDS TAAPVCVISP VSSWGAYIIA
LIGGILTAHG FADSGHLSVF VQMIPMNFYA IFSLLLLLCV AFMGLDIGPM REHELNAQRG
NLYDETKGLP PGANADLPEA ETGKILGLFL PITVLVFATL YFMISSGAQV LAAEGIEFSL
ISAFEKTDVS SSLFLGSLFG LAVALVVNVV QGVEKSMIVK GVVQGARSML PAIYILLFAW
TIAGIIGQLE TGKFMASLAT GNIPFAFLPA LMFILAGLTA FSTGTSWGTF GIMLPIAADM
AMGSHTGMML PMLASVLAGA VFGDHCSPIS DTTILSSTGA SCHHIDHVVT QLPYALIVAF
ISLVGYLVLG FTESVSAGLV TCSVLLVMSV IWLRIKSTGA VK