| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2488 |
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| Symbol | |
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| ID | 5080905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2886865 |
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| End bp | 2887536 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640499656 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001184008 |
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| Protein GI | 146293584 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.177305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGATAT TTGATTACCA GCCCCCAGCA ATTCCTTGGC TAGACATCCG CTATAAAGAT
AGAGACTTGA TTATTATCAA TAAACCCTCT GGGTTATTGT CTAATCCAGG TATTGCAGCA
CACACCTATG ATTGTGCGTT AACCCGCTTA CAACGCCTTT ATCCAGAAAC GATTTTAGTA
CATCGGCTTG ACTGCGCGAC CTCAGGTATT ATGGTGTTTG CTCGGAATAA AAAAGCCGAA
TCGCATTTAA AAACTCAGTT TCAAGATAGA CAAAGCAAGA AAGTTTACAT TGCCGAGGTC
ATGGGCTTGA TTGCCAATGA GCAAGGAATT ATCAATCTAT CGATAGCACC TAATTGTGAG
CATCCTCCCT ACCAAAAAGC ACTCCAAGCG GGAGAGGCTG GAGGCAAAAG TGCCCTTACT
CATTATCGCG TTTTAGAACG TAGGAAAAAC AGCACCTTAG TTGAACTAAC ACCTGAGACA
GGTCGAACCC ACCAGCTCAG AGTACATATG CTCGCCTTAG GGCATCCTAT TTTAGGTGAT
GAATTTTACG GTGATGCCGC CGTTATTAAC GCTAAACCAC GTTTATGCTT ACATGCCCAA
AGCCTTCGTT TTAGTCACCC TTATTCGGGG AAACCAATGA GCTTTCACAG CAAACATCCT
TTTAATGAAT AA
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| Protein sequence | MQIFDYQPPA IPWLDIRYKD RDLIIINKPS GLLSNPGIAA HTYDCALTRL QRLYPETILV
HRLDCATSGI MVFARNKKAE SHLKTQFQDR QSKKVYIAEV MGLIANEQGI INLSIAPNCE
HPPYQKALQA GEAGGKSALT HYRVLERRKN STLVELTPET GRTHQLRVHM LALGHPILGD
EFYGDAAVIN AKPRLCLHAQ SLRFSHPYSG KPMSFHSKHP FNE
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