Gene Sputcn32_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2484 
Symboltgt 
ID5080901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2883336 
End bp2884460 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content47% 
IMG OID640499652 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_001184004 
Protein GI146293580 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.74895e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTG AATTAGACAC TACCGACGGG CGTGCGCGCC GTGGTCGGTT GATTTTTGAC 
CGTGGCACAG TAGAAACCCC CGCTTTTATG CCGGTAGGAA CCTATGGCAC AGTGAAAGGT
ATGACACCTG AAGAAGTGCG TGCCACAGGC GCAGATATTC TGCTCGGTAA CACTTTCCAT
TTATGGCTGC GCCCAGGCGA AGAAATCATG CGTAAGCACG GTGACTTGCA TGATTTTATG
AACTGGCAGC GGCCTATTTT AACGGACTCG GGCGGTTTCC AAGTCTTTAG CCTTGGCGAT
ATCCGTAAAA TTACCGAAGA AGGTGTGCAC TTCCGCTCGC CCATCAACGG TGAGAAAATC
TTCTTAGATC CTGAAAAATC CATGCAAATT CAAGATGCAT TGGGCAGTGA TGTGGTGATG
ATTTTCGACG AATGTACGCC GTATCCCGCC ACCGAAGATG AAGCGCGCAA GTCAATGCAG
ATGTCACTGC GTTGGGCAAA ACGTTCACGC GACGAGTTTG ATCGCTTGAA AAATCCAAAC
TCACTGTTTG GTATTATTCA GGGCGGCGTG TATGAAGATT TACGCGACGA AAGCTTAAAA
GGCTTAGTCG AGATTGGTTT TGACGGTTAT GCCGTCGGTG GTTTGGCTGT AGGTGAACCT
AAAGCAGATA TGCATCGCAT TCTTGAGCAT ATTTGCCCGC AAATTCCTGC AGACAAGCCT
CGCTATCTGA TGGGGGTCGG TAAACCAGAA GATTTAGTTG AAGGTGTACG TCGTGGTGTT
GACATGTTTG ACTGTGTGAT GCCAACCCGT AATGCCCGCA ACGGTCATCT GTTTACGAGT
GAAGGTGTGA TCAAAATACG CAATGCGCGT CATCGAGATG ACACGTCACC ACTTGATACT
AAGTGTGATT GTTATACCTG TAAAAATTAT TCACGGGCGT ACCTTTATCA CTTAGATCGT
TGTAATGAGA TTCTGGGTGC GCGTTTAAAC ACCATTCACA ACTTGAGATA CTATCAAATG
TTAATGGAAG GTTTGCGCGG TGCGATTGAG ACGGGTACAT TAGACGCCTT TGTGGCGGAC
TTCTATACCA GTCAGGGTCG CGAAGTACCA GAGTTAGTCG ATTGA
 
Protein sequence
MKFELDTTDG RARRGRLIFD RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH 
LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI
FLDPEKSMQI QDALGSDVVM IFDECTPYPA TEDEARKSMQ MSLRWAKRSR DEFDRLKNPN
SLFGIIQGGV YEDLRDESLK GLVEIGFDGY AVGGLAVGEP KADMHRILEH ICPQIPADKP
RYLMGVGKPE DLVEGVRRGV DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTSPLDT
KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVAD
FYTSQGREVP ELVD