Gene Sputcn32_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2483 
SymbolyajC 
ID5080900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2882976 
End bp2883308 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content44% 
IMG OID640499651 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001184003 
Protein GI146293579 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.29003e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATTT CAAATGCATA TGCAAGCGCT GCCGGCGCAC CACAAGGTGG CGGCACGATG 
GAACTGATTT TCATGCTGGC GATTTTCGGC CTGATTTTCT ATTTCATGAT TTTCCGTCCG
CAATCAAAAC GCGTTAAAGA GCACAAAAAT CTGATGTCTT CATTAGGCAA AGGCGATGAA
GTGTTAACCA GTGGTGGGAT TTTAGGTAAG ATTGCAAAAA TCAGCGATGA CAGCGATTAC
GTGCTACTGA GCCTTAATGA CACGACGCAA ATCACGATCA AGAAAGACTA TATTGCAGCT
GTATTGCCTA AGGGCTCTAT CCAGTCGTTG TAA
 
Protein sequence
MFISNAYASA AGAPQGGGTM ELIFMLAIFG LIFYFMIFRP QSKRVKEHKN LMSSLGKGDE 
VLTSGGILGK IAKISDDSDY VLLSLNDTTQ ITIKKDYIAA VLPKGSIQSL