Gene Sputcn32_2472 details

Gene Information

• Locus tag: Sputcn32_2472
• ID: 5078606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 2869016
• End bp: 2869732
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640499640
• Product: hypothetical protein
• Protein accession: YP_001183992
• Protein GI: 146293568
• COG category: [S] Function unknown
• COG ID: [COG2859] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000142
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA CAAACACACT CCCCGCCCTA TTATTGGGTG GTTTCTTATG TGCAGGACTC 
ATTTATGTGG GTCACAGTGC AAGCTCCGCA TTGCTTGAAA TGAAAGCCAT GGAACGGACT 
GTCACGGTAA AAGGGCTGGC TGAAAAAGAA GTCAAAGCCA ATGTGGCTAT TTGGCCTATC 
AATTTCACTG AGGTCGATAA TAACCTGCCA AAACTCTATG AAACTGTACA ACAAAAAACC 
GATCGCGTGG TTAGCTTTTT AAAAGAGCAA GGCTTTAGCG ACACAGAAAT CACAATCTCA 
CTGCCGTCCA TTGAAGATCG TCAAGCTCAA GGTTATGTCG ATCCCAACGT CAGATACCGT 
TACTCGGCAA AAGTGAATTT ATCCATTTAC ACCCCGCAAA TCGATTTAAT GCTAAATACC 
CGCAAACAAA TGATTAATCT GGCGAAAGAA GGTATTGCGA TTGCAAGCCA AGACTATGAG 
AACCGAACTG AATTCCTCTT TACTGAACTC AATACAGTCA AGCCAACCAT GGTGCAAGAG 
GCGACTCAAA ATGCCCGCGA AGTAGCTGAA AAATTTGCTA AAGATTCGGA CTCTCGCCTC 
GGGAAAATTA AAAGCGCGAG TCAAGGCCAG TTTACGATTT CAGACCGCGA CAGCAGCACG 
CCTTACATTA AACAAATTAG GATTGTTTCA ACATTGACCT ATTATTTGAA TGACTAA 

 

Protein sequence

MEKTNTLPAL LLGGFLCAGL IYVGHSASSA LLEMKAMERT VTVKGLAEKE VKANVAIWPI 
NFTEVDNNLP KLYETVQQKT DRVVSFLKEQ GFSDTEITIS LPSIEDRQAQ GYVDPNVRYR 
YSAKVNLSIY TPQIDLMLNT RKQMINLAKE GIAIASQDYE NRTEFLFTEL NTVKPTMVQE 
ATQNAREVAE KFAKDSDSRL GKIKSASQGQ FTISDRDSST PYIKQIRIVS TLTYYLND