Gene Sputcn32_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2470 
Symbol 
ID5078604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2867080 
End bp2868417 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content44% 
IMG OID640499638 
Productaromatic hydrocarbon degradation membrane protein 
Protein accessionYP_001183990 
Protein GI146293566 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.67182e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA TTGAGAGAAT AATAATGAAA ACATTCAACA AGACACTCAT TGCCGTTTCG 
GTCGCATTAG CAAGCACGCA GACCTTGGCA GCGGGTTTCC AGCTCAATAG CCAATCCGCA
ACCGGCATTG GACGGGCATT TTCTGGTGAT GCTGTGATTG CCGATAACGC TTCTGTTCTG
TCACGCAACC CTGCTGCTAT GGCATTATTT GATAAAGATG CACTCTCTGT TGGTTTAACC
TATGTTGATA TTACCGTTGA TGTAAAAGAT GTTAACTTTG CGGGCGGTGC AATCGATCTT
GGCAGCATCG ATGATGCGGG CAGCACAAAA CTTATCCCTA ACCTTTTCTA TATCCACCCT
ATTAACGATA AATTCGCAGT AGGTTTTGCC GTATTCTCCA ATTTCGGTAC AGGCACTGAT
GCCAGTTCTC TGTCTAAAAA TGAGCCTTTA GCGCCCTTTG ACCTTTTAGG TAAAACAGAA
GTCACCACAG TTAACTTTAA TACCAGTGTT TCATACCGCA TAAACGATAT GTTCAGTATC
GGTGCAGGTC TTGATGGTGT TTATGGTGAA GGTCGCCTCA CTCGCGATGC CGGAACCACG
CCTATCGTTG ACGTCGATGC CGATGGCTGG GCATTAGGTG GGATTGTAGG GGCAACCATT
GAGCTTAATA AAGAAAACCG TTTTGGTTTA AGTTACCGCT TTAGCCCAAC GGTCAATGTT
AAAGGTGATG TTAATACCAT TTCTACTAAG GATTTATCCG CACTAGGACT TGGGGCACAA
ACCAAACTTG CCACCAGCTT TGATAGCCTT GATGTGCCAT TAGCGGATAT CTTCCAATTT
GCAGGTTTCC ATCAACTAAC ACCTAAATTT GCGTTGCACT ACACAGCCCA ATTCACTAAA
TGGGGTGACT TTCACCAAAT TACAGCGAAA GATGGTGTAG CGACCATTCT CCCTGGTCAA
GCCGGTGCGG GTATGTCAAT CAATGCTGGT GATATCGCTC TCAAAGAGTA TCAATGGAAG
GACTCATGGT TAATGAGTCT GGGTGGTACA TACACTATCA ATGACCAATT TACAGTTCGC
GCGGGTTACA TGCACGATCA AGGCGTAGTG GATGAAATTA GCTCTATCTC TATTCCAGAC
TCAGATCGCA ACTGGTTTAC TGCAGGTATG AGCTACCATG TAAACTCGCA AAATACGGTT
GATTTTGGTA TCGCCTATGT TAAAGGTGAA GAAGTTCACT TAATTGAAAA TAGCGCTATT
ACAGGCATAG GTCCCGTCAA TGCAATTACG GAATCAAGCG GTATGTACTA CTCAGTACAG
TACAGTTATC AGTTCTAA
 
Protein sequence
MIKIERIIMK TFNKTLIAVS VALASTQTLA AGFQLNSQSA TGIGRAFSGD AVIADNASVL 
SRNPAAMALF DKDALSVGLT YVDITVDVKD VNFAGGAIDL GSIDDAGSTK LIPNLFYIHP
INDKFAVGFA VFSNFGTGTD ASSLSKNEPL APFDLLGKTE VTTVNFNTSV SYRINDMFSI
GAGLDGVYGE GRLTRDAGTT PIVDVDADGW ALGGIVGATI ELNKENRFGL SYRFSPTVNV
KGDVNTISTK DLSALGLGAQ TKLATSFDSL DVPLADIFQF AGFHQLTPKF ALHYTAQFTK
WGDFHQITAK DGVATILPGQ AGAGMSINAG DIALKEYQWK DSWLMSLGGT YTINDQFTVR
AGYMHDQGVV DEISSISIPD SDRNWFTAGM SYHVNSQNTV DFGIAYVKGE EVHLIENSAI
TGIGPVNAIT ESSGMYYSVQ YSYQF