| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2469 |
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| Symbol | |
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| ID | 5078603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2865265 |
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| End bp | 2866758 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499637 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001183989 |
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| Protein GI | 146293565 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00121427 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGCCA CTTTTAATAA TAAAAAGATG GTATGGGCAA TTATGGTGAT CGAAAACCCA
ATTTTAATCA CATTTGTAGG TTATTTAGTA TTAATGATGG CCATCGGTTT TTGGGCTTAC
CGCGCCACGG ATACTGTTGA TGACTATATT TTAGGTGGAC GTAAGATGGG GCCCGCTGTT
ACGGCACTTA GCGTTGGGGC GTCAGATATG TCAGGCTGGT TATTACTCGG CTTACCCGGC
GCTGTATACT TAAGTGGTTT AAGTGCTGCA TGGATTGGGA TCGGTCTTAT TTTTGGCGCG
TGGCTTAACT GGTTATTTGT GGCAAAACGT CTGCGTATTT ACACTCAATT GGCCGATAAT
GCCCTCACCC TTCCGGATTT TTTTGAAAAA CGCTTCCACG ATAATCAAGG CTACCTCAAG
CTCGTTTCAG CCGTCACTAT CTTAGTCTTT TTTACGTTCT ATGCCTCTTC AGGTATGGTG
GGGGGGGCCA TTTTATTTGA AAAGGTCTTT GGTTTAGATT ACACCGCAGC CTTAGTGATT
GGCTCAGCTA TTATTGTTGG CTACACTTTT ATTGGCGGGT TCTTTGCGGT CAGTTGGACT
GATTTTTTTC AAGGTTGTCT GATGCTTATC GCATTATTGA TTATCCCTTT TGCGATTTTT
TCCCACCCAG AAACCCATGC GGGAATTGAC GCTATTGACC CTGCCATGTT GGCACTCGTC
AATGATAAAA CGACCACCAT AGGTATGATA TCGCTCCTTG CTTGGGGACT GGGTTATTTT
GGTCAACCAC ATATTCTGTC ACGCTTTATG GCGATTGGCA GTGCTAATGC ACTACCACTA
TCTCGCCGTA TTGCTATGAG CTGGATGATA CTTTCACTTA TTGGTGCTCT AGCAACAGGC
TTGGCGGGTT CGGTATATTT TGCAACAACG CCCTTAGCGA ACGCCGAAAC GGTTTTTATT
CATTTAGCTC AAGCGGCCTT TAATCCATGG ATTGGTGGTC TATTAATCGC CGCTATTTTA
TCGGCCATTA TGAGCACTAT TGATTCGCAA CTTTTAGTTT GCTCAAGCGT TATTACTGAG
GATTTTTATC GCAAATGGCT AAGACCGACT GCTGATGATA GAGAGTTAAT GATGGTGGGT
CGTTTAGGCG TACTCGCTAT CGCTGTGATT GCGGGCATTA TTGCACTGAA CCCTGAGAGC
AGCGTACTCA GTCTAGTGAG TTATGCTTGG GCGGGCTTTG GGGCCGCCTT TGGTCCCGTT
GTCTTGTTAT CCCTATTTTG GAAGCAATAT AGCCGCAATG GTGCTATTGC TACTATTATT
GTTGGCGCCT TAACCGTGGT GATCTGGAAA CAATTAACGG GGGGAATTTT TGATGTATAT
GAAATTCTAC CCGGCTTTAT TTTGGCGATA ATGACAGGGG TTGTTGTCAG TAAATTGTCT
GCACCTAATG CCAAAATCAT GGCTGAGTTT GAGCAATTTA AGTCCACACT GTAA
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| Protein sequence | MLATFNNKKM VWAIMVIENP ILITFVGYLV LMMAIGFWAY RATDTVDDYI LGGRKMGPAV
TALSVGASDM SGWLLLGLPG AVYLSGLSAA WIGIGLIFGA WLNWLFVAKR LRIYTQLADN
ALTLPDFFEK RFHDNQGYLK LVSAVTILVF FTFYASSGMV GGAILFEKVF GLDYTAALVI
GSAIIVGYTF IGGFFAVSWT DFFQGCLMLI ALLIIPFAIF SHPETHAGID AIDPAMLALV
NDKTTTIGMI SLLAWGLGYF GQPHILSRFM AIGSANALPL SRRIAMSWMI LSLIGALATG
LAGSVYFATT PLANAETVFI HLAQAAFNPW IGGLLIAAIL SAIMSTIDSQ LLVCSSVITE
DFYRKWLRPT ADDRELMMVG RLGVLAIAVI AGIIALNPES SVLSLVSYAW AGFGAAFGPV
VLLSLFWKQY SRNGAIATII VGALTVVIWK QLTGGIFDVY EILPGFILAI MTGVVVSKLS
APNAKIMAEF EQFKSTL
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