| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2459 |
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| Symbol | fadJ |
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| ID | 5078593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2852897 |
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| End bp | 2855017 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640499627 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001183979 |
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| Protein GI | 146293555 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.740158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA CCTTTAATTT AACCCGCCGC GACGACGGCA TCGCCATTTT GACTATGGAT
GTTCCTGGCG AAACCATGAA CACCCTAAAA GCACAGTTTG GCCCTGAAAT CAGTGAGATT
CTGGCTGAGA TTAAAAGCGA TCCTCATATT CGTGGACTTG TGCTGATCTC TGGCAAAAAA
GACTCTTTCG TCGCGGGCGC GGATATTTCC ATGCTCGATG CCTGTAAAAC GGCGGGCGAT
GCCAAAGCCT TATCCCAGCA AGGGCATGTG GTTTTTAATG AGTTAGAAGC GTTAAAAATT
CCTGTGGTTG CGGCAATCCA TGGTGCCTGT TTAGGTGGTG GCTTAGAGTT AGCCTTAGCC
TGTCATCAAA GGGTATGTAG CGACGATGGT AAAACCATGC TCGGCGTACC GGAAGTTCAA
CTTGGCCTAT TGCCTGGCGG CGGTGGGACG CAACGTTTGC CTCGTTTAGT CGGCATTACC
ACTGCCTTAG ATATGATGCT CACCGGTAAA CAAATCCGTC CTAAACAAGC CTTGAAAATG
GGCTTAGTGA ATGATGTTGT ACCGCAGACC ATTTTGCTGC AAACCGCCGT TGAGATGGCG
CTTGCTGGTA AACGTGCACC GAAACCTATT AAAAAGTCAC TCGTTAATCA AGTGCTTGAA
GGCACGAGCT TTGGCCGTAA CATTATTTTC GATCAAGCGA CTAAACAAGT CGAAAAGAAA
ACCCAAGGTA ATTATCCAGC ACCAGCCAAG ATTATTGACT GCGTGCGTCA AGGGATTGCG
AAGGGGATGC AAAAAGGGTT AGAAGTCGAA GCAAGTCACT TTGCCGAATT AGTGGTATCA
AAAGAATCTG AAGCGCTGCG CAGTATTTTT TTCGCCACCA CTGAAATGAA GAAAGAAACC
GGCGCAGAGG GTGCAACGCC GCGTAAAGTG AAGAAAGCGG TGATCTTAGG TGGTGGTTTA
ATGGGCGGAG GCATTGCCTC TGTGACTACC ACTAAGGCTA AAATCCCCGT TCGGGTAAAA
GACATCAGCG AAAAGGGCTT AAGCAATGCA TTAGCCTACG CTTATAAGTT GTTGGATAAA
GGGGTAAAGC GCCGCCATAT GACGCCTGCT GTCCGTGACA ACTTAATGGC GTTGATGACG
ACAACCACTG AGTATAAAGG CGTTAAAGAT GCCGACATCG TTGTGGAAGC GGTATTTGAA
GACTTAGCGC TTAAGCATCA AATGGTGAAA GACATTGAGC GTGAGTGTGG TGAGCACACG
ATTTTTGCTT CAAATACCTC ATCTTTGCCT ATTAGCCAAA TTGCCGAAGC GGCAACGCGT
CCTGAAAACG TGATTGGTCT ACATTATTTC TCGCCAGTGG AAAAAATGCC GCTGGTGGAA
GTGATTGCCC ACGCTAAAAC CTCGCCAGAA ACCATTGCGA CAACCGTCGC ATTTGCCCGT
AAGCAAGGTA AAACACCGAT AGTGGTACAG GATGGTGCGG GTTTCTACGT GAACCGTATT
CTGGCGCTCT ATATGAACGA GGCGGCGCAA TTACTACTCG AAGGCCAAAG TGTTGAGCAT
TTGGATAAAG CTTTAGTGAA ATTTGGCTTC CCAGTGGGAC CTATTACTTT GCTCGACGAA
GTGGGTATCG ACGTGGGCGC AAAAATTTCA CCGATCCTTG ATAAAGAACT GGGTGAACGC
TTTAAAGCGC CAGCCGCATT TGACAAGCTT TTGGGTGACG ATCGTAAAGG CCGCAAAAAT
GGCAAAGGTT TCTATCAATA CGGCGCATCG AGCAAGAAAA CTAAAGCTGT CGATGAAACT
GTGTATGGCG TATTAGGCAT TAAGCCTAGC ACCAATAAAG ATGCAAAAGC ACTTGCTGAG
CGTTGTGTTG TACAAATGCT CAATGAAGCG GTGCGTTGCT TGGATGAGGG TATTATCGCA
TCGCCAAGAG ATGGTGATAT TGGCGCTATT TTTGGTATTG GCTTCCCGCC ATTCCTCGGT
GGTCCATTCC ATTATATTGA CACTTTAGGC GCCGCGAACT TAGTGAAGAT CCTTGAAGGT
TATCAAAGTC AATTCGGTAA CAGATTCGAA CCTTGTGAGC GTTTAAAAAC GATGGCTAGA
GAGAATGTTA GCTTTTTCTA A
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| Protein sequence | MEKTFNLTRR DDGIAILTMD VPGETMNTLK AQFGPEISEI LAEIKSDPHI RGLVLISGKK
DSFVAGADIS MLDACKTAGD AKALSQQGHV VFNELEALKI PVVAAIHGAC LGGGLELALA
CHQRVCSDDG KTMLGVPEVQ LGLLPGGGGT QRLPRLVGIT TALDMMLTGK QIRPKQALKM
GLVNDVVPQT ILLQTAVEMA LAGKRAPKPI KKSLVNQVLE GTSFGRNIIF DQATKQVEKK
TQGNYPAPAK IIDCVRQGIA KGMQKGLEVE ASHFAELVVS KESEALRSIF FATTEMKKET
GAEGATPRKV KKAVILGGGL MGGGIASVTT TKAKIPVRVK DISEKGLSNA LAYAYKLLDK
GVKRRHMTPA VRDNLMALMT TTTEYKGVKD ADIVVEAVFE DLALKHQMVK DIERECGEHT
IFASNTSSLP ISQIAEAATR PENVIGLHYF SPVEKMPLVE VIAHAKTSPE TIATTVAFAR
KQGKTPIVVQ DGAGFYVNRI LALYMNEAAQ LLLEGQSVEH LDKALVKFGF PVGPITLLDE
VGIDVGAKIS PILDKELGER FKAPAAFDKL LGDDRKGRKN GKGFYQYGAS SKKTKAVDET
VYGVLGIKPS TNKDAKALAE RCVVQMLNEA VRCLDEGIIA SPRDGDIGAI FGIGFPPFLG
GPFHYIDTLG AANLVKILEG YQSQFGNRFE PCERLKTMAR ENVSFF
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