Gene Sputcn32_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2446 
Symbol 
ID5078580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2834986 
End bp2837028 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content50% 
IMG OID640499614 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001183966 
Protein GI146293542 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID[TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000288925 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTGCAG AGCCCAATAA ACCTTGCCAA ATTAAGCGCG ATTACCCGCA ATTAATCAAC 
CTTTATCCCG CAACCGCTCA CAATGATGCA CACTATCTCA GCAAGTTGAG CATTTATCAG
CAGCGGGTAT TTGAGGCTCA TTCACAGCAA AAACTCTTAG TATTAGGGCA AATGGGTTTA
GGTAACGGGC TTGAACTCTT ATCTTGGTGG CGGACTCAGA CGAACCCTAA CCAACGATTA
CTCCTTAAAG TCTTTGAACC CAATCCGATT AATGCGTACG AACTTAAATT ACTTTGGGAT
CAATCCGCCA GTTTAGCCAA AGTGCCTGAA CTTGAGCTAC TTGCCCAATG CTTACTTCAT
ACAGAGCCGA CGGCTATTAT AGGTTGTCAG AGATTAATTT TTGATGACGG TCGTACCACA
ATCGACCTGC ACTTTGGTGA TATTCAATCC CAACTCAGTT CACTCATCCA TTCTCCGCTG
CACCCCGTTC AGCACTGGCT GGTATTGCCC CATCTACAAA ATGGGTTACA TCAGCAGATC
CATTGGCAGA TGGCAAAACT CAGTGACGAT AGCGCCACTG TTGCAACGAT TGGATTAAAC
GAATCAAGCG GATTAAGCGA AACAACAGTC AATCGTTTCC AAGCCTGTGG CTTTGAGGTG
AGGGATTTTA CCTGCGCTGA AATACAGACA AACCCTCAGC CTGATGCCAT TTTGTTACAC
GAGCGCCACG TCTTACGCCG GCAAGACGCT AAAGCCTATG CCTTTAATCC TATGGCTGCA
ATCTTATCCT CGGACGCACC CAGCTCGATT GCCATCATAG GCGGCGGGTT AGCCTCGGCG
CATTTGGCGC TGTCTTTGGC GGAGCGTGGC CAAAGCACGC AGATCTTTTG TAAAGATGCC
AAGCTTGGCC AAGGCGCTTC GGGCAACCGC CAAGGGGCGA TTTATCCGCT GCTGACACCG
GAAAATGATG AATTAAGCCG CTTCTTCCAG CAGGCATTCT TATTTAGCCG CCGTCGAGTA
CAGGCGCTGA CATCTGCCCC CGCCCCAAAT CAAACGCCGA TTTCCCATAA TTTTTGCGGG
GTATTGCAAA CCGCCCACGA TGAACGCAGC CAATTACGAC TCGATAAAAT TATTCAAAGC
CAGAACTGGC CAAGTGAAAT AGCCTATCGA GTCGATGCCC AGCAAGCCAA TTGTCTTGCG
AACATTAATA TCGACAAATC AGGCTTTTTC TATCCGCTGG CTGGCTGGGT TTGTCCCTAC
GAATATGCCG AAGCCGCACT ACAAAAAGCG CAGCAGCTTA CCGCGGTCAA ACTCCATTTG
GAGACTGAGA TCCTTGAAAT TGAGCATCAA AGTGAAGGTT GGTATTTAAT CACCGCTAAG
CATCGCTTTG GCCCCTTTGC GCAAGTTGTG CTCGCCAATG GCGCAGCACT CACGCAATTT
GATGCCAGCA ACAAATTACA AATTAGCCCT TTTCGCGGCC AAGTCAGCCA TGTGCCAGCT
CAATTTCAAT TGAGTCAGCT CGCGACTGTG CTGTGCGCCA ACGGTTATTT AACCCCGAGT
CACGAAGGAC TCCACTGCCT TGGCGCGAGT TACGTTAAAG AACCTAAGCA TTTAGATTTT
TGCCCGCAGG AGCAGCAAGA AAACCTCGCA AAAATGCACG AGAGTTATCC CAATCAGCCT
TGGCTTGAAG ATATCGACAT GAGTGGCAAC AATGCCCGTG TTGGCGTGCG TATGGTGACG
CGGGATCATT TCCCTATGAT GGGCTGCGCG CCCGATGTGG CGCAAATTAT TAAGGATTAT
GCAGAGCATC AACTCACGAA AGAAAGTCGC CACTACTGGC AAACCACGCC AGCGCCGGTG
CACGAAGGGC TGTATATTCT TGGCGGGTTA GGCTCACGGG GACTAAGTTC TGGGCCATTG
GCCGCCGAAT GTCTCGCGGC GCAGCTTTGC GGCGAACCAA TACCACTCGA TAAAGCGACT
CTGTGTAAAC TCAACCCCAA TCGCATGTGG CTGCGAAAAT TACTCAAGGG CAAAGCGCTC
TAG
 
Protein sequence
MTAEPNKPCQ IKRDYPQLIN LYPATAHNDA HYLSKLSIYQ QRVFEAHSQQ KLLVLGQMGL 
GNGLELLSWW RTQTNPNQRL LLKVFEPNPI NAYELKLLWD QSASLAKVPE LELLAQCLLH
TEPTAIIGCQ RLIFDDGRTT IDLHFGDIQS QLSSLIHSPL HPVQHWLVLP HLQNGLHQQI
HWQMAKLSDD SATVATIGLN ESSGLSETTV NRFQACGFEV RDFTCAEIQT NPQPDAILLH
ERHVLRRQDA KAYAFNPMAA ILSSDAPSSI AIIGGGLASA HLALSLAERG QSTQIFCKDA
KLGQGASGNR QGAIYPLLTP ENDELSRFFQ QAFLFSRRRV QALTSAPAPN QTPISHNFCG
VLQTAHDERS QLRLDKIIQS QNWPSEIAYR VDAQQANCLA NINIDKSGFF YPLAGWVCPY
EYAEAALQKA QQLTAVKLHL ETEILEIEHQ SEGWYLITAK HRFGPFAQVV LANGAALTQF
DASNKLQISP FRGQVSHVPA QFQLSQLATV LCANGYLTPS HEGLHCLGAS YVKEPKHLDF
CPQEQQENLA KMHESYPNQP WLEDIDMSGN NARVGVRMVT RDHFPMMGCA PDVAQIIKDY
AEHQLTKESR HYWQTTPAPV HEGLYILGGL GSRGLSSGPL AAECLAAQLC GEPIPLDKAT
LCKLNPNRMW LRKLLKGKAL