| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2445 |
|---|
| Symbol | |
|---|
| ID | 5078579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2833636 |
|---|
| End bp | 2834871 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640499613 |
|---|
| Product | beta-ketoacyl synthase |
|---|
| Protein accession | YP_001183965 |
|---|
| Protein GI | 146293541 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000400584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACACAA TGGATAGCAA TAAAATGAAA AGAGTCGTGA TCACCGGAAT GGGTGTTGTT
TCAAGTATCG GTAATAACAA GCAAGAAGTG ACCGAGTCAC TGAAAGCGGG CCGCAGTGGT
ATTACGCATT CAGCTCAGTT TGAAGAGATG CAATTACGTA GCCATGTATG GGGTGACATC
AAGTTAAACC CTGCTGAGCA TATCGATCGT AAGGCATTGC GTTTTATGGG TGATGCGGCA
GCTTATGCCT ACATTGCTAT GCAAGAAGCG GTTGCCGATG CCAATTTAAC TGAAGAGCAG
TATTCAGATC CGCGCGTAGG GCTGATTGTG GGTACAGGCG GAGCATCATC GTCTAACCAA
GTACAATCTG CCGATACACT GCGTGAAAAA GGCGTTAAAC GTGTTGGTCC GTATATTGTG
CCTCGCATCA TGTCGAGCAC GGCCAGCGCC TGTTTAGCCA CGCCATTTAA AATTAAAGGC
ATGAATTATT CTATCAGTTC AGCCTGTGCA ACTAGCGCCC ACTGTATTGG TCACGCCGTT
GAACTTATCC AAATGGGTAA GCAAGACATG GTGTTTGCCG GTGGTGCTGA AGAAGTTGAT
TGGACGCTGA CTATGGGCTT CGACGCTATG GGCGCACTGT CAACTAAGTA CAATGCCACA
CCAGAAAAAG CCTCTCGTAC CTATGATGCA GACCGTGATG GTTTTGTGAT CTCTGGCGGC
GGCGGTATTT TAGTGGTTGA AGAGTTAGAG CATGCTCTGG CTCGCGGCGC AAAAATTTAC
GCTGAAGTGA TTGGTTATGG CGCGTCTTCA GACGGTTATG ACATGGTGGC GCCATCGGGT
GAAGGCGCTG TGCGTTGTAT GCAAATGGCG ATGATGGATG TCGATACCCC AATCGATTAC
ATCAATACTC ACGGCACTTC AACGCCAGTG GGCGACGTGC GTGAATTAGA AGCGCTACGT
GAAGTTTTCA AAGACAAGTG CCCACCGATT GCATCGACTA AGTCTATGAC AGGTCATGCA
TTAGGCGCTG CAGGCGTACA TGAAGCGATT TACAGCTTAA TCATGATGGA AAACAGCTTT
ATTGCCCCAA GCATCAATAT CGATAATCTG GACGAAGCGG CGAAAGATAT GCCTATCGTG
CGTGAATATC GCGATACTGA GCTGAATACA GTCATGAGTA ACAGCTTTGG TTTTGGTGGT
ACAAACGCCA CGCTAGTGAT GCGTAAATTC AAATAA
|
|---|
| Protein sequence | MYTMDSNKMK RVVITGMGVV SSIGNNKQEV TESLKAGRSG ITHSAQFEEM QLRSHVWGDI
KLNPAEHIDR KALRFMGDAA AYAYIAMQEA VADANLTEEQ YSDPRVGLIV GTGGASSSNQ
VQSADTLREK GVKRVGPYIV PRIMSSTASA CLATPFKIKG MNYSISSACA TSAHCIGHAV
ELIQMGKQDM VFAGGAEEVD WTLTMGFDAM GALSTKYNAT PEKASRTYDA DRDGFVISGG
GGILVVEELE HALARGAKIY AEVIGYGASS DGYDMVAPSG EGAVRCMQMA MMDVDTPIDY
INTHGTSTPV GDVRELEALR EVFKDKCPPI ASTKSMTGHA LGAAGVHEAI YSLIMMENSF
IAPSINIDNL DEAAKDMPIV REYRDTELNT VMSNSFGFGG TNATLVMRKF K
|
|---|
| |