Gene Sputcn32_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2443 
Symbol 
ID5078577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp2831328 
End bp2832344 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content45% 
IMG OID640499611 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001183963 
Protein GI146293539 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000737036 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAGG AATTTAATGT TGTCGTTTTA GGTGCATCGG GCGCAGTGGG TCAAACTATG 
ATTGAGATCC TCGAAGAGCG TAACTTCCCG GTTGCCAATT TGTACCCTTT AGCCAGTAGC 
CGCAGCGCCG GTGAAACGGT CAGCTTTCAT GGCAAACAAA TTACCATTCT GGACGTAGAA 
ACCTTCGATT GGAGCCAAGC CCAAATCGGT TTCTTCTCTG CCGGTGGTGA TGTTTCTGCC 
ATATGGGCAC CGATTGCCGC TGAAGCAGGT TGTGTTGTGA TTGATAACAC CTCTCACTTT 
AGATACGACA TTGATATTCC TTTGGTTGTC CCCGAAGTGA ATCCGCATGC TATCGCGGAT 
TTTCGCAATC GCAATATCAT TGCTAACCCA AATTGCTCAA CGATTCAAAT GCTGGTGGCA 
CTTAAGCCTA TTTATGATGC CTATGGGATC AGCCGTATTA ATGTCGCGAC TTATCAGTCA 
GTATCGGGTA CAGGTAAAAA AGCCATTGAA GAATTGGCGC ATCAGTGCAC TAAATTACTG 
CAAGGTTTAC CCGCTGACGC TGAAGTCTAT CCGAAGCAAA TTGCTTTTAA CGTATTGCCA 
CAAATCGATA AATTTATGGA TAACGGCTAT ACCAAAGAAG AAATGAAAAT GGTCTGGGAA 
ACCCAGAAGA TTTTCGGTGA CGATGAGATT TTAGTGAATG CGACAGCTGT ACGTGTGCCT 
GTGTTTTATG GTCACTCGGA AGCCATTAAT ATCGAAACTC GTCAGCCTGT TGATGCCGAA 
GACGTTAAAG CTTTACTGCG TAATGCCGAA GGAGTGGTAT TGTTTGAATT CGATGAGGAT 
TATCCAACAG CAGTGACCGA TGCCGCAGGA ACCGATCCGG TTTATGTGGG TCGCATTCGT 
AAGGATATTT CTCATTCTCA CGGCCTTAAT CTGTGGGTCG TGTCTGACAA TATTCGTAAA 
GGTGCAGCCT TAAATAGTGT GCAAATTGCC GAGATCTTAG TGAGAGATTA TTACTAA
 
Protein sequence
MSQEFNVVVL GASGAVGQTM IEILEERNFP VANLYPLASS RSAGETVSFH GKQITILDVE 
TFDWSQAQIG FFSAGGDVSA IWAPIAAEAG CVVIDNTSHF RYDIDIPLVV PEVNPHAIAD 
FRNRNIIANP NCSTIQMLVA LKPIYDAYGI SRINVATYQS VSGTGKKAIE ELAHQCTKLL 
QGLPADAEVY PKQIAFNVLP QIDKFMDNGY TKEEMKMVWE TQKIFGDDEI LVNATAVRVP 
VFYGHSEAIN IETRQPVDAE DVKALLRNAE GVVLFEFDED YPTAVTDAAG TDPVYVGRIR 
KDISHSHGLN LWVVSDNIRK GAALNSVQIA EILVRDYY