| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_2442 |
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| Symbol | |
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| ID | 5078576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2827857 |
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| End bp | 2831150 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640499610 |
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| Product | hypothetical protein |
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| Protein accession | YP_001183962 |
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| Protein GI | 146293538 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.39531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTC GCACTTCGTA TCTTGTCGGT CTAATGGCCA CTGTTTTAGC TGTTTCTTCT
ACTGCTTATT TTATTGATCC CGCTGTTGCT GCAGATACGC CTAAAGTAAA ACCTTTAAAA
ATCATGGGGC CAGACGGACA GATCCGTCAA GTTAATCAAC AATATGGTCC AACGACCTCA
AAAGACACTT TTTGGAGTAT TGCACAAAAA GTCCGCCCCG ATGCGAGTGT GAGTGTCTAT
CAAGTTATGG CAGCTTTATT TGAAGCCAAC CCCCACGCCT TTAACTCTGA TAATTACAAC
AGCCTTGAGC GTGGCATGAT TTTGCTTATT CCTTCGAAAG AAGTCATGCT TGCCATTCCC
AATAGTGTGG CAATTGCTCG TGCTGAACGT GATGATAAGT TAGCGCGTGC AGGCGTAAAA
TCTCCAGCTA AGACAACCAC TCCTCGCGCT AAAGAACCTA ACACCACGAA AGCCATTGCG
CAGACATCAC CTGTCGTTGC TCCTGTTGTT AAGGTTGAAC CTAAAACTGA GCTTAAGGTT
GAACCTAAAG TTGAGCCAAA GTCTGAACCT GTTGAATCTA AACAGGATGC TGTGGCAAAA
ACAGCCACTG TGGTTAAGTC TGAACCTAAA ATGTTGAGTT CGGATGTCAA TGCACGCCTA
GAGGCTGCGG AGCGGAAAAC CCTCTCTTTG ACCGATGAAT TAGCTCGAAC CCAAGATCAA
CTCTCAGTTC GTAACTCGGA TGTTGAAGCA TTAAAAGCTA AGGTTGAAGA ATTAAATCAA
CAAATTGCGG TACTTGAAGA AACGCTTCTC GCTAGTAAGC AGCAGAACCA AGCGTTAAAA
GCAGAATTGG AAGCGGCACA ATCCGCTGAT GTTGTTTCCG TTTCTGAACC CGATATGCCA
ATAGAGCCAG ATGACTTATG GCGGAAGATT ATCAATAATC CTGCAATGTT AATTGCAGCC
GCAGTAATAC CAGCGCTACT GATTTTATTA CTTGTATTTA TGATGCTTCG TCGTAAACGT
AATAAAGAGC GCCGTGAGTT AGCGGCGCAA CAAGCCGCTA TGGCTGCCGC TGGCGCAGGT
ATGGCGACAG GAGCCAGTAT CTTATCGATG GATGAGGATG ACCTCCATGA TATGGCCATT
CATTTAGATA CGGATCATGC TGATTCTATA GATAGCTTAT TAGATGTTGG CAGTGTAAGC
CTGCAACCTG AACAAGGTAT GGTTGATAGC GATGAACAGA TGAACATCGC ATCTGAAATG
TTTATCGATA CAGGCAGTAC GCAAGCAGAA CCACAATTTG AAGAAGACGA AGGCCAATCA
CTTGATGACC TTTGGGCTGA GGCTATGGGC GATCAAGAGG AAGAATCCGT TGAGGATAAA
CCCAAATCAG GGAACATTCT TGAGGAGGAA GATCTCGATG CTCTGCTGGC GGGACTTGGC
ACGGAAGACT CAGCCAATCA AGCCCCTGAT GATGTTGATA CCTTAGCGAA TGTTGCTGAA
GCGTCGGTTG ATACTGATGA TTTTACGGAT ATTGAAACTC CGGAGAACAA TGATGCAAGC
ATTGATTTAG GCGCTGAAAT TGCCGCAGAA CTGGATGCTG AGTTAGATGA TCTTGATATC
GATAACAATG ATGATATCGA TGCGTTACTT GCCGATTTCG ATAAACTTAC ACCTTCAGAA
CAGGCTGCTG ATCTTGGTGA GGAAATTGCC GCAGAACTCG ACAGTGATCT TGAGTCTTTG
GGGGTAGAAG AGATTGATGA TATTGATGCC TTATTGGCGG ATTTTGATAA GCCTACCGCC
CCTGAACCCG ATTTACGCGA TGAAATTGCT GCTGAATTAG ATGAAGAACT GAATGATATT
GCAGTAGCCG ATACCGAGGA TATTGATACC TTACTTGCTG GGTTTGATGA GCCAGCCAGT
GCTGCTGTAT CTGTGGATGA TGACGTTGCC CAAGAAATCG CTGCTGAGCT CGAAGATGAA
CTCGATACCA ATTTGTCAGC CACCGATGAT GATCTCGAAC AGCTTCTTGC CGAATTTGAT
ATGCAAGATG AAGACGATAT TGCTCCCCAC AGCGATATAT TTTCAGAAAC GGGAACAGTC
GATACACCAA GTATTGCCGA TAATCGCGGC ATGCATGATG AGATTGCCGA AGAACTCGAA
GCATCATTAC CCGAAGATCT TTCAGATTCA GAAGATGATC TTGATGCACT TTTAGCTGAG
TTTGATGTTC CAGAACAGGG AGAAGCTGAC AGTGATGATT TTAACTTTGA TATAGAAACG
ACGCCGCTTG ATATTCAAGA AAGTCCTACA GATGAAGATA ATTTACTCAA AGGGATTGGA
GCTAGCCACG CGCTTGACGG CACTGATGAT ACTTTTACCT TAGTAGAAGA CCTCAGTGAT
AATATCGATG CGACTGCCGA AGACGCAAAA TTCACCGGTT TCAATAGTGA TGATGTTAAT
TCCGATGCTC TGACTACAGC GGCGCTGGCC GCTACTGTTG CTGCAGCAGC GAGTGCTAAG
GAAAAAGAAT CCTCTTTCTT CAATGATTTA AAAGCAAATA AGAGTAAAGA ACCCCACGTG
CTGGATTGGG ATACAGAGCT TGATTTTGCG TCTACATCCC CAGAGCCTAA GGTTAATATC
ACACCAACCC TCGATGAGTC GATGGATGCG AGTTTAGATG CACCAGTGAT TGCTAAGTCG
AGCGCGCTTG ATTTTCCATC AGAAACCACT AGGGCTGAGC CTAAAATTGA CTTTAATCTT
GATGATGATC TCGATTTAAG CACAGATCTT GATCTGAGTG ATGACAGTGT TCTTGCGGCA
TTTACCGCAA ATACCGATTT TGATGACGAT GATATATTAA CGACCGAAGA TAGCTTTGCC
CTCGATGATG AACATACTCT GACGGTCGAT GAAGCCTTAG CCGCATTGGA TGCGCAGGAA
TCCCGTCAAT CAAAAAAATT AGTGCCAGAG CACGATTTGA CCAACTTCCA GAATGAAAAT
GGTTTTATTG ATATCGATAA ATTACTTAAC GATGCGGAGC AAGATCGCTC CGATATAGAT
CTCTATCCTG AAGTTGACAT TGAGATGAGT GACGTTGGTG CCTTACTTGG CGATGCCGCT
ATAATTGATG TCGATGATGA AGAAAACTCG GTCAGTGCCA AACTGGATTT AGCCCGTGCT
TATATTGAAA TTGACGACAG TGATAGTGCA AAAGCATTGC TCAAAGAAGT GCAAATAGAT
GGTAATGAAC ACCAACAGGA TGAGGCCGGA CGTTTACTAA AAGAGATTAG TTAA
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| Protein sequence | MKFRTSYLVG LMATVLAVSS TAYFIDPAVA ADTPKVKPLK IMGPDGQIRQ VNQQYGPTTS
KDTFWSIAQK VRPDASVSVY QVMAALFEAN PHAFNSDNYN SLERGMILLI PSKEVMLAIP
NSVAIARAER DDKLARAGVK SPAKTTTPRA KEPNTTKAIA QTSPVVAPVV KVEPKTELKV
EPKVEPKSEP VESKQDAVAK TATVVKSEPK MLSSDVNARL EAAERKTLSL TDELARTQDQ
LSVRNSDVEA LKAKVEELNQ QIAVLEETLL ASKQQNQALK AELEAAQSAD VVSVSEPDMP
IEPDDLWRKI INNPAMLIAA AVIPALLILL LVFMMLRRKR NKERRELAAQ QAAMAAAGAG
MATGASILSM DEDDLHDMAI HLDTDHADSI DSLLDVGSVS LQPEQGMVDS DEQMNIASEM
FIDTGSTQAE PQFEEDEGQS LDDLWAEAMG DQEEESVEDK PKSGNILEEE DLDALLAGLG
TEDSANQAPD DVDTLANVAE ASVDTDDFTD IETPENNDAS IDLGAEIAAE LDAELDDLDI
DNNDDIDALL ADFDKLTPSE QAADLGEEIA AELDSDLESL GVEEIDDIDA LLADFDKPTA
PEPDLRDEIA AELDEELNDI AVADTEDIDT LLAGFDEPAS AAVSVDDDVA QEIAAELEDE
LDTNLSATDD DLEQLLAEFD MQDEDDIAPH SDIFSETGTV DTPSIADNRG MHDEIAEELE
ASLPEDLSDS EDDLDALLAE FDVPEQGEAD SDDFNFDIET TPLDIQESPT DEDNLLKGIG
ASHALDGTDD TFTLVEDLSD NIDATAEDAK FTGFNSDDVN SDALTTAALA ATVAAAASAK
EKESSFFNDL KANKSKEPHV LDWDTELDFA STSPEPKVNI TPTLDESMDA SLDAPVIAKS
SALDFPSETT RAEPKIDFNL DDDLDLSTDL DLSDDSVLAA FTANTDFDDD DILTTEDSFA
LDDEHTLTVD EALAALDAQE SRQSKKLVPE HDLTNFQNEN GFIDIDKLLN DAEQDRSDID
LYPEVDIEMS DVGALLGDAA IIDVDDEENS VSAKLDLARA YIEIDDSDSA KALLKEVQID
GNEHQQDEAG RLLKEIS
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