Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2418 |
Symbol | |
ID | 5080496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2800765 |
End bp | 2801577 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640499586 |
Product | exonuclease III |
Protein accession | YP_001183938 |
Protein GI | 146293514 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.234508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAG TGTCCTTTAA TATCAATGGA CTGCGTTCCC GCCTGCATCA ATTGCAGGCG TTAATCGACA GCCACAAACC CGACATTATC GGCCTACAAG AAACCAAAGT GCACGATGAA GCCTTCCCAC TCGCTGAAGT TGAGGCGATG GGCTATCAGG TACATTACCA CGGTGGTAAG GCTCACTATG GCGTGGCTAT GCTGTCAAAG GTTGCACCAC AAAAAATACA AAAAGGGTTT CCTAGCGATG ACGAAGATGC CCAGCGCCGA ATGATTATCG GCACTTTCTC CCAAGCAAAT GGCCGTCCAC TGACCGTATT CAATGGCTAT TTCCCCCAGG GCGAAAGCAT AGACCACCCA ACAAAATATC CTGCTAAACG TAAGTTTTAT CAGGATTTAA TGCACTACTT GCAGACGAAC CATAGCAACG ATGAAGATAT CGCCATCATA GGTGATATCA ATATTTCACC GACCGATTTA GATATCGGCA TTGGCGAAGT CAATCGTAAG CGTTGGCTAA AAACCGGTAA ATGCAGCTTC CAACCCGAAG AACGTGAATG GTTAAAAACC TTACAAGACT GGGGCTTAAT CGACACTTTC CGTCAATTAC ATCCAGAGCG CACTGAGCGT TATTCTTGGT TCGATTACCG CAGCAAAGGT TTCGATGATA ACCGCGGCCT ACGCATTGAT GTGATTTTAG CAACACCCTC GCTTGCTGCG CGCTTAGTCG AATCCGATGT CGATTACGAT CTACGCGGTA TCGATAAACC CTCTGACCAC GCGCCCATTT GGAGCACGTT CAAAGAAGCT TAA
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Protein sequence | MKIVSFNING LRSRLHQLQA LIDSHKPDII GLQETKVHDE AFPLAEVEAM GYQVHYHGGK AHYGVAMLSK VAPQKIQKGF PSDDEDAQRR MIIGTFSQAN GRPLTVFNGY FPQGESIDHP TKYPAKRKFY QDLMHYLQTN HSNDEDIAII GDINISPTDL DIGIGEVNRK RWLKTGKCSF QPEEREWLKT LQDWGLIDTF RQLHPERTER YSWFDYRSKG FDDNRGLRID VILATPSLAA RLVESDVDYD LRGIDKPSDH APIWSTFKEA
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