Gene Sputcn32_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2418 
Symbol 
ID5080496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2800765 
End bp2801577 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content47% 
IMG OID640499586 
Productexonuclease III 
Protein accessionYP_001183938 
Protein GI146293514 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.234508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAG TGTCCTTTAA TATCAATGGA CTGCGTTCCC GCCTGCATCA ATTGCAGGCG 
TTAATCGACA GCCACAAACC CGACATTATC GGCCTACAAG AAACCAAAGT GCACGATGAA
GCCTTCCCAC TCGCTGAAGT TGAGGCGATG GGCTATCAGG TACATTACCA CGGTGGTAAG
GCTCACTATG GCGTGGCTAT GCTGTCAAAG GTTGCACCAC AAAAAATACA AAAAGGGTTT
CCTAGCGATG ACGAAGATGC CCAGCGCCGA ATGATTATCG GCACTTTCTC CCAAGCAAAT
GGCCGTCCAC TGACCGTATT CAATGGCTAT TTCCCCCAGG GCGAAAGCAT AGACCACCCA
ACAAAATATC CTGCTAAACG TAAGTTTTAT CAGGATTTAA TGCACTACTT GCAGACGAAC
CATAGCAACG ATGAAGATAT CGCCATCATA GGTGATATCA ATATTTCACC GACCGATTTA
GATATCGGCA TTGGCGAAGT CAATCGTAAG CGTTGGCTAA AAACCGGTAA ATGCAGCTTC
CAACCCGAAG AACGTGAATG GTTAAAAACC TTACAAGACT GGGGCTTAAT CGACACTTTC
CGTCAATTAC ATCCAGAGCG CACTGAGCGT TATTCTTGGT TCGATTACCG CAGCAAAGGT
TTCGATGATA ACCGCGGCCT ACGCATTGAT GTGATTTTAG CAACACCCTC GCTTGCTGCG
CGCTTAGTCG AATCCGATGT CGATTACGAT CTACGCGGTA TCGATAAACC CTCTGACCAC
GCGCCCATTT GGAGCACGTT CAAAGAAGCT TAA
 
Protein sequence
MKIVSFNING LRSRLHQLQA LIDSHKPDII GLQETKVHDE AFPLAEVEAM GYQVHYHGGK 
AHYGVAMLSK VAPQKIQKGF PSDDEDAQRR MIIGTFSQAN GRPLTVFNGY FPQGESIDHP
TKYPAKRKFY QDLMHYLQTN HSNDEDIAII GDINISPTDL DIGIGEVNRK RWLKTGKCSF
QPEEREWLKT LQDWGLIDTF RQLHPERTER YSWFDYRSKG FDDNRGLRID VILATPSLAA
RLVESDVDYD LRGIDKPSDH APIWSTFKEA