Gene Sputcn32_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2354 
Symbol 
ID5080382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp2718359 
End bp2719060 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content45% 
IMG OID640499522 
ProductGntR family transcriptional regulator 
Protein accessionYP_001183874 
Protein GI146293450 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000394326 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAC AGCCGAAAAT AGACGGAAAA ATGAGTCGAA CTACGCCTAT AGTCCACAAA 
ACCCGCACTC AGTTAGTTGT AGAAGCGCTC AGAGAGAAAA TTCTTTCAGG GGACATAGCC 
GCAGGAGAAC CGCTCAGACA AAGTGCTTTA GCTGAAGCCT TGCATGTGAG TAGGATCCCA 
GTAAGAGAAG CATTAGTGCA ACTCGAAGCG GAAGGGTTAG TCAAATTCGA ACCGCATAAG 
GGTGCAACTG CAACCGTATT ATCCGTCGAA CAAGTTACTG AACTATTTGA ATTACGAGCA 
ATGATTGAAA CGGATCTGCT TGCAAAGGCA ATTCCGCAAC TCCAAGAACA AGATTTAATT 
AAAGCAGAAC AGGTACTTGA GCAATTGGAA TCGGCCTTTA AACATGAAGA TGCCGTCGCC 
AGTTGGAGCG AGCTAAATAC ACAATTTCAC ACTTGTTTAT ATCAAGCCGC TAATCGCCCA 
CATACCCTTG AGGTCGTCCA CGGCCTTAAT ACAAACTGCG ATAGATATAT TCGTTTGCAA 
TTGTTGTTAG CAGGGGGAAT TCCTGCTGCA GAGCATGAGC ACCGTGCCTT GCTCAACCAT 
TGCAAATTAA GAGAAACAGA GAAAGCAACG GCGTTACTGC GACATCATAT TTTGCATGCC 
GCGATGACTA TCCGCGAGCT TGTCGCCAAA CAGGTGGACT AG
 
Protein sequence
MKEQPKIDGK MSRTTPIVHK TRTQLVVEAL REKILSGDIA AGEPLRQSAL AEALHVSRIP 
VREALVQLEA EGLVKFEPHK GATATVLSVE QVTELFELRA MIETDLLAKA IPQLQEQDLI 
KAEQVLEQLE SAFKHEDAVA SWSELNTQFH TCLYQAANRP HTLEVVHGLN TNCDRYIRLQ 
LLLAGGIPAA EHEHRALLNH CKLRETEKAT ALLRHHILHA AMTIRELVAK QVD