Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2319 |
Symbol | |
ID | 5080292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 2669340 |
End bp | 2670284 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640499482 |
Product | putative CheW protein |
Protein accession | YP_001183839 |
Protein GI | 146293415 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00776156 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAACG TATTGGCAAC CGTAGATCAA CGTACCAAAC TCGTTGGTGA AAATCGGCTT GAATTACTGC TTTTTCGTAT AAATTCCACG CAGCTATTTG CCATTAATGT GTTCAAAGTG AAAGAAGTGG TAAAACTTCC GCCCCTTAAT GCCATGCCAG GCAGTCATCC GCATATATTT GGTGTTGCAA ATATTCGAGG TATATCCATT CCTGTCATTG ATTTACGTTC TGCTATTGGT TTTAAGCCTG TTGCTCCAGG TGATGATGCT AATATGATCA TCACTGAATA TAACCGCAGT GTTCAAGGTT TCTTAGTGGG CAAGGTAGAA CATATCATCA ACATGACATG GAGCGACATT ATGCCGCCGC CTAAAATGGC TGGACGGAAT AATTATCTGA CGGCAATTAC CCGCATTGAG CACCAAGGCC AGTCGCAATT AGTGTCGATT ATTGACGTAG AGAAAGTACT GGCGGAGATC ATTCACTACG ATATTAGGCT TTCTGAGGGT GTACTTGACG AAACCTTAGT CCATGAAATG CCTGGGCGTA AGATTTTGAT TGTAGATGAT TCTTCAACGG CAAGACGCCA GGTTCGCGAG ACGTTAGGTC AACTCGGTAT TGAAATCATT GAGGCTTCCG ATGGTTTGCA AGCATTACAG TTATTGCAAA AATGGCGTGA TGAAGGGAAG CAGATCTCAA AAGAATTATT GATGATGATT ACCGATGCCG AAATGCCTGA AATGGACGGT TATAAACTCA CCCATGAAGT CCGCAGCGAT AAAGCAATGG CTGATTTATT TATTACGCTA AATACTTCGC TTAGTGGTAG TTTTAACCAT GCTATGGTTG AAAAGGTTGG ATGCGATCGT TTTATTTCAA AATTCCAACC CGATCTGTTA GTGGAAGTGG TTCAGGAAAG ATTAAGACAA ATTATTGCGC AATAA
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Protein sequence | MANVLATVDQ RTKLVGENRL ELLLFRINST QLFAINVFKV KEVVKLPPLN AMPGSHPHIF GVANIRGISI PVIDLRSAIG FKPVAPGDDA NMIITEYNRS VQGFLVGKVE HIINMTWSDI MPPPKMAGRN NYLTAITRIE HQGQSQLVSI IDVEKVLAEI IHYDIRLSEG VLDETLVHEM PGRKILIVDD SSTARRQVRE TLGQLGIEII EASDGLQALQ LLQKWRDEGK QISKELLMMI TDAEMPEMDG YKLTHEVRSD KAMADLFITL NTSLSGSFNH AMVEKVGCDR FISKFQPDLL VEVVQERLRQ IIAQ
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