Gene Sputcn32_2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2316 
Symbol 
ID5080289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2666670 
End bp2667989 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content46% 
IMG OID640499479 
Productlytic murein transglycosylase 
Protein accessionYP_001183836 
Protein GI146293412 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.38033e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATCAA ATATTGGAGT TGTCGATTTG ATTAAAATGA AAGGGTTGAC CTATCTTGCG 
GCTAGCTTTG CAGCCTGCGT TAGTGTGAGT GCTTGCTCGA GTGCGCCAAC GTCCAGTGTT
AGCAGTAATA ATGCCATTGC AGATCCTAAT GCGGCACTTG CCACTGTGGA TATCAATGCC
ACAGTGCAAT TAAATGCCGA TGCCTTTGCT AGTTGCCTCA CAACGCTACA GGCACGAGCG
CGAAGTGAGG GGTTATCAGA GGAAACCATT AATAATACCG TTGCGTATTT ACAATTTGTG
CCGCGCGTGA TTGAGCTCGA CCAACAGCAA CCTGAATTTA GTCAAACTTT TGCGAATTAT
TTTACTAAGC GAGCTACCGA TTGGCGTGTC AATGAAGGGC GACGTTTATT ACAAAAGCAT
CGAGCATTGC TGGATAAGTT GTCGCTGCAG TATGGGGTAC CACCACAATA TATTCTGTCT
TTTTGGGGAC TTGAGACCAA TTATGGCTCT TACAAAGGAA AAATGGCCGT ATTGGACTCG
CTGGCAACCT TGGCCTGTGA GCCACGTCGT AGCAGTTATT TCACCACCGA ATTGATGCAA
GCACTTAAGT TAAAAGAAAA ATATCAGTTT GATAAAAACA CTATGGTGGG CTCTTGGGCG
GGGGCAATGG GGCATACACA GTTTATGCCT TCAGCCTATG CTAAGTATGC TATTGATGGC
GACGGTGACG GTAAAGTGGA TTTGTGGAAT AGCACGGCAG ATGCACTAAC CTCTGCGGCT
AATTTTTTAC AAAATTTAGG TTGGCAGCGT AATGAGCGTT GGGGGCGTGA AGTTTTACTA
CCAAAGAATT TTAGTTACAG CCATTTAGGT GCAAAACAGA CATTGCCTTT AGCTGAATGG
GCTGCGCAGT CTGTAACCCT GACTAATGGA CAACCTTTGC CACAAGCGGA TATTCAGGCT
GCATTATATT TACCCGCGGG TCATACGGGT CCTGCATTCC TAGGGTATGA AAACTTTAAT
GTGATCATGC GTTGGAACCG TTCAGAGTTC TATGCCATTA CCGTAGGACA TCTAGCGGAT
CGTATTAATG GTGGCGAGCC TCTAAAAGTT GCTCCGCCTG AACAGCCTCG TCTCAGTCGT
GAGCAAGTTA AACAACTGCA AGAAAAATTG AATGAGGCGG GGTTTGAGGT TGGTAAACCC
GATGGTGTGC TAGGACGTAA TTCAATGGCT GGGATCCAAG CTTTTCAGCG TAGTAAAAAA
ATGATTGCTG ATGGTTTCCC AAGTCCTGAG GTGTTCGCCG CTTTAGGGCT AACGCTTTAA
 
Protein sequence
MKSNIGVVDL IKMKGLTYLA ASFAACVSVS ACSSAPTSSV SSNNAIADPN AALATVDINA 
TVQLNADAFA SCLTTLQARA RSEGLSEETI NNTVAYLQFV PRVIELDQQQ PEFSQTFANY
FTKRATDWRV NEGRRLLQKH RALLDKLSLQ YGVPPQYILS FWGLETNYGS YKGKMAVLDS
LATLACEPRR SSYFTTELMQ ALKLKEKYQF DKNTMVGSWA GAMGHTQFMP SAYAKYAIDG
DGDGKVDLWN STADALTSAA NFLQNLGWQR NERWGREVLL PKNFSYSHLG AKQTLPLAEW
AAQSVTLTNG QPLPQADIQA ALYLPAGHTG PAFLGYENFN VIMRWNRSEF YAITVGHLAD
RINGGEPLKV APPEQPRLSR EQVKQLQEKL NEAGFEVGKP DGVLGRNSMA GIQAFQRSKK
MIADGFPSPE VFAALGLTL